Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GM160_RS00880 Genome accession   NZ_CP046415
Coordinates   184391..184822 (+) Length   143 a.a.
NCBI ID   WP_136866799.1    Uniprot ID   -
Organism   Guyparkeria halophila strain sp2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 179391..189822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GM160_RS00860 (GM160_00860) - 179960..180805 (-) 846 WP_156227434.1 energy transducer TonB -
  GM160_RS00865 (GM160_00865) - 180824..181885 (-) 1062 WP_156227436.1 FAD:protein FMN transferase -
  GM160_RS00870 (GM160_00870) gshB 181882..182826 (-) 945 WP_136866801.1 glutathione synthase -
  GM160_RS00875 (GM160_00875) gshA 182850..184193 (-) 1344 WP_156227438.1 glutamate--cysteine ligase -
  GM160_RS00880 (GM160_00880) pilG 184391..184822 (+) 432 WP_136866799.1 response regulator Regulator
  GM160_RS00885 (GM160_00885) - 184901..185263 (+) 363 WP_136866798.1 response regulator -
  GM160_RS00890 (GM160_00890) - 185268..185816 (+) 549 WP_156227440.1 chemotaxis protein CheW -
  GM160_RS00895 (GM160_00895) - 185889..187925 (+) 2037 WP_156227442.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 143 a.a.        Molecular weight: 15389.40 Da        Isoelectric Point: 4.3074

>NTDB_id=404168 GM160_RS00880 WP_136866799.1 184391..184822(+) (pilG) [Guyparkeria halophila strain sp2]
MEATENHAGLDGLRVMVVDDSKTIRRTADSILSKAGCEVESAIDGFDALARIGAFDPDVVIIDILMPRLDGYQTTALIKN
NDRFADTPIILLSSKDSIFDKARGRIVGASDYLTKPFNSDEILAAVERFAEGRPVADEGAMAG

Nucleotide


Download         Length: 432 bp        

>NTDB_id=404168 GM160_RS00880 WP_136866799.1 184391..184822(+) (pilG) [Guyparkeria halophila strain sp2]
ATGGAAGCGACAGAGAATCACGCCGGCCTCGACGGCCTGAGGGTCATGGTGGTCGACGACAGCAAGACCATCCGACGGAC
CGCAGACAGCATCCTCAGCAAGGCGGGCTGCGAGGTGGAAAGCGCGATCGACGGATTCGACGCGCTGGCCCGTATCGGCG
CCTTCGACCCGGACGTGGTCATCATCGACATCCTCATGCCGCGTCTCGACGGCTACCAGACCACGGCGCTGATCAAGAAC
AACGATCGCTTCGCCGACACCCCCATCATTCTGCTGTCCAGCAAGGACAGCATCTTCGACAAGGCGCGCGGCCGCATTGT
CGGTGCCTCCGATTACCTCACCAAGCCCTTCAACAGCGACGAGATCCTCGCTGCGGTCGAGCGTTTCGCCGAGGGCCGCC
CCGTGGCCGACGAAGGCGCGATGGCGGGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.475

82.517

0.483

Multiple sequence alignment