Detailed information NTG0404162

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: GNY17_RS19565
• Genome accession: NZ_CP046412
• Coordinates: 326582..327679 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 19-021-D1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 321582..332679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNY17_RS19550 (GNY17_19550)	-	322245..323300 (-)	1056	WP_015313427.1	HlyD family secretion protein	-
GNY17_RS19555 (GNY17_19555)	-	323339..323794 (-)	456	WP_005477342.1	MarR family transcriptional regulator	-
GNY17_RS19560 (GNY17_19560)	luxQ	324006..326582 (-)	2577	WP_140137138.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
GNY17_RS19565 (GNY17_19565)	luxP	326582..327679 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GNY17_RS19570 (GNY17_19570)	-	328031..328351 (-)	321	WP_023623674.1	GIY-YIG nuclease family protein	-
GNY17_RS19575 (GNY17_19575)	-	328348..328998 (-)	651	WP_017447360.1	YceH family protein	-
GNY17_RS19580 (GNY17_19580)	-	329175..329390 (-)	216	WP_196952926.1	hypothetical protein	-
GNY17_RS27905	-	329397..329552 (-)	156	WP_196952920.1	hypothetical protein	-
GNY17_RS19590 (GNY17_19590)	-	329717..330031 (+)	315	WP_005453573.1	DUF496 family protein	-
GNY17_RS19595 (GNY17_19595)	-	330154..331491 (+)	1338	WP_025790808.1	MATE family efflux transporter	-
GNY17_RS19600 (GNY17_19600)	-	331565..332542 (-)	978	WP_025790806.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=404162 GNY17_RS19565 WP_005463467.1 326582..327679(-) (luxP) [Vibrio parahaemolyticus strain 19-021-D1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=404162 GNY17_RS19565 WP_005463467.1 326582..327679(-) (luxP) [Vibrio parahaemolyticus strain 19-021-D1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCATCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCAGCAAAAGCCAGCTTGAAAAAGTACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATCAATGGCTGGGGTGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644