Detailed information NTG0040398

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SPYALAB49_RS04445
• Genome accession: NC_017596
• Coordinates: 882307..883377 (-)
• Length: 356 a.a.
• NCBI ID: WP_014635475.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes Alab49
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 877307..888377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYALAB49_RS04425 (SPYALAB49_000899)	citX	877888..878466 (+)	579	WP_011054513.1	citrate lyase holo-[acyl-carrier protein] synthase	-
SPYALAB49_RS04430 (SPYALAB49_000900)	-	878481..879875 (+)	1395	WP_014635474.1	oxaloacetate decarboxylase subunit alpha	-
SPYALAB49_RS04435 (SPYALAB49_000901)	citC	879985..881037 (-)	1053	WP_002991776.1	[citrate (pro-3S)-lyase] ligase	-
SPYALAB49_RS04440 (SPYALAB49_000902)	-	881126..881608 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
SPYALAB49_RS04445 (SPYALAB49_000903)	xerS	882307..883377 (-)	1071	WP_014635475.1	tyrosine recombinase XerS	Machinery gene
SPYALAB49_RS04450 (SPYALAB49_000904)	-	883847..884545 (+)	699	WP_014635476.1	helix-turn-helix transcriptional regulator	-
SPYALAB49_RS04455 (SPYALAB49_000905)	ffh	884680..886242 (-)	1563	WP_002993302.1	signal recognition particle protein	-
SPYALAB49_RS04460 (SPYALAB49_000906)	-	886257..886589 (-)	333	WP_002989745.1	putative DNA-binding protein	-
SPYALAB49_RS04465 (SPYALAB49_000907)	-	886687..887385 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41472.55 Da
• Isoelectric Point: 9.4755

>NTDB_id=40398 SPYALAB49_RS04445 WP_014635475.1 882307..883377(-) (xerS) [Streptococcus pyogenes Alab49]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTKAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAEGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=40398 SPYALAB49_RS04445 WP_014635475.1 882307..883377(-) (xerS) [Streptococcus pyogenes Alab49]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGAAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGGAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.337	100	0.803