Detailed information NTG0403935

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HWQ66_RS06345
• Genome accession: NZ_CP058223
• Coordinates: 1378784..1379767 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 550
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1373784..1384767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWQ66_RS06330 (HWQ66_06335)	dppA	1375084..1376691 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
HWQ66_RS06335 (HWQ66_06340)	dppB	1376842..1377861 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
HWQ66_RS06340 (HWQ66_06345)	dppC	1377871..1378773 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HWQ66_RS06345 (HWQ66_06350)	amiE	1378784..1379767 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HWQ66_RS06350 (HWQ66_06355)	dppF	1379764..1380768 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HWQ66_RS06355 (HWQ66_06360)	yhjV	1380798..1382069 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
HWQ66_RS06360 (HWQ66_06365)	-	1382545..1382652 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
HWQ66_RS06365 (HWQ66_06370)	-	1383028..1383135 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=403935 HWQ66_RS06345 WP_001196486.1 1378784..1379767(+) (amiE) [Escherichia coli strain 550]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=403935 HWQ66_RS06345 WP_001196486.1 1378784..1379767(+) (amiE) [Escherichia coli strain 550]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404