Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HWQ66_RS01160 | Genome accession | NZ_CP058223 |
| Coordinates | 256813..257253 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain 550 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 251813..262253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWQ66_RS01140 (HWQ66_01140) | aroP | 252811..254184 (+) | 1374 | WP_000969912.1 | aromatic amino acid transporter AroP | - |
| HWQ66_RS01145 (HWQ66_01145) | ampE | 254227..255081 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| HWQ66_RS01150 (HWQ66_01150) | ampD | 255078..255629 (-) | 552 | WP_000923726.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| HWQ66_RS01155 (HWQ66_01155) | nadC | 255717..256610 (+) | 894 | WP_001135167.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HWQ66_RS01160 (HWQ66_01160) | pilA | 256813..257253 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| HWQ66_RS01165 (HWQ66_01165) | pilB | 257263..258648 (+) | 1386 | WP_001025168.1 | type II secretion system protein GspE | Machinery gene |
| HWQ66_RS01170 (HWQ66_01170) | hofC | 258638..259840 (+) | 1203 | WP_000157287.1 | protein transport protein HofC | - |
| HWQ66_RS01175 (HWQ66_01175) | guaC | 259875..260918 (-) | 1044 | WP_001217337.1 | GMP reductase | - |
| HWQ66_RS01180 (HWQ66_01180) | - | 261074..261118 (-) | 45 | WP_120795372.1 | protein YacM | - |
| HWQ66_RS01185 (HWQ66_01185) | coaE | 261143..261763 (+) | 621 | WP_001269513.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=403909 HWQ66_RS01160 WP_000360904.1 256813..257253(+) (pilA) [Escherichia coli strain 550]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=403909 HWQ66_RS01160 WP_000360904.1 256813..257253(+) (pilA) [Escherichia coli strain 550]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |