Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GD442_RS05790 Genome accession   NZ_CP046398
Coordinates   1132907..1133083 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus sp. A260     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1127907..1138083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GD442_RS05770 (GD442_05780) clpC 1128238..1130838 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  GD442_RS05775 (GD442_05785) - 1130877..1131059 (-) 183 WP_001211116.1 YjzD family protein -
  GD442_RS05780 (GD442_05790) - 1131216..1131950 (+) 735 WP_000028712.1 hydrolase -
  GD442_RS05785 (GD442_05795) - 1131980..1132852 (+) 873 WP_002204825.1 NAD(P)-dependent oxidoreductase -
  GD442_RS05790 (GD442_05800) comZ 1132907..1133083 (+) 177 WP_001986215.1 ComZ family protein Regulator
  GD442_RS05795 (GD442_05805) fabH 1133473..1134405 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  GD442_RS05800 (GD442_05810) fabF 1134437..1135675 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  GD442_RS05805 (GD442_05815) - 1135782..1136570 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  GD442_RS05810 (GD442_05820) - 1136714..1137460 (+) 747 WP_000966127.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=403900 GD442_RS05790 WP_001986215.1 1132907..1133083(+) (comZ) [Bacillus sp. A260]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=403900 GD442_RS05790 WP_001986215.1 1132907..1133083(+) (comZ) [Bacillus sp. A260]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment