Detailed information NTG0403827

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HW370_RS01175
• Genome accession: NZ_CP058222
• Coordinates: 242408..243391 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain CFT073
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 237408..248391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HW370_RS01155 (HW370_01140)	dppA	238552..240159 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HW370_RS01160 (HW370_01145)	-	240221..240448 (-)	228	WP_000198577.1	hypothetical protein	-
HW370_RS01165 (HW370_01150)	dppB	240466..241485 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HW370_RS01170 (HW370_01155)	dppC	241495..242397 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HW370_RS01175 (HW370_01160)	amiE	242408..243391 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HW370_RS01180 (HW370_01165)	dppF	243388..244392 (+)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HW370_RS01185 (HW370_01170)	yhjV	244422..245693 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HW370_RS01190 (HW370_01175)	-	246169..246276 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HW370_RS01195 (HW370_01180)	-	246652..246759 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=403827 HW370_RS01175 WP_001196477.1 242408..243391(+) (amiE) [Escherichia coli strain CFT073]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=403827 HW370_RS01175 WP_001196477.1 242408..243391(+) (amiE) [Escherichia coli strain CFT073]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404