Detailed information NTG0403544

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: HWH78_RS26125
• Genome accession: NZ_CP056774
• Coordinates: 5624895..5625920 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain CDN129
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5619895..5630920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWH78_RS26100 (HWH78_26100)	aroE	5620097..5620921 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
HWH78_RS26105 (HWH78_26105)	hemF	5620979..5621896 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
HWH78_RS26110 (HWH78_26110)	-	5622087..5623064 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
HWH78_RS26115 (HWH78_26115)	-	5623074..5623631 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
HWH78_RS26120 (HWH78_26120)	dprA	5623672..5624760 (-)	1089	WP_003114641.1	DNA-processing protein DprA	Machinery gene
HWH78_RS26125 (HWH78_26125)	tsaP	5624895..5625920 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
HWH78_RS26130 (HWH78_26130)	def	5626059..5626565 (+)	507	WP_003107059.1	peptide deformylase	-
HWH78_RS26135 (HWH78_26135)	fmt	5626620..5627564 (+)	945	WP_003131369.1	methionyl-tRNA formyltransferase	-
HWH78_RS26140 (HWH78_26140)	rsmB	5627561..5628865 (+)	1305	WP_003161949.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
HWH78_RS26145 (HWH78_26145)	trkA	5628893..5630266 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
HWH78_RS26150 (HWH78_26150)	-	5630415..5630732 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=403544 HWH78_RS26125 WP_003097294.1 5624895..5625920(-) (tsaP) [Pseudomonas aeruginosa strain CDN129]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=403544 HWH78_RS26125 WP_003097294.1 5624895..5625920(-) (tsaP) [Pseudomonas aeruginosa strain CDN129]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTTAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAACTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393