Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GL188_RS00015 Genome accession   NZ_CP046359
Coordinates   1488..2246 (+) Length   252 a.a.
NCBI ID   WP_000410383.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 573     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1..7246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL188_RS00010 (GL188_00010) htrA 249..1430 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  GL188_RS00015 (GL188_00015) spo0J 1488..2246 (+) 759 WP_000410383.1 ParB/RepB/Spo0J family partition protein Regulator
  GL188_RS00020 (GL188_00020) dnaA 2459..3820 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  GL188_RS00025 (GL188_00025) dnaN 3979..5115 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  GL188_RS00030 (GL188_00030) - 5180..5374 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  GL188_RS00035 (GL188_00035) ychF 5458..6573 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  GL188_RS00040 (GL188_00040) pth 6645..7214 (+) 570 WP_000163930.1 aminoacyl-tRNA hydrolase -

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=403305 GL188_RS00015 WP_000410383.1 1488..2246(+) (spo0J) [Streptococcus pneumoniae strain 573]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=403305 GL188_RS00015 WP_000410383.1 1488..2246(+) (spo0J) [Streptococcus pneumoniae strain 573]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
GCTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504


Multiple sequence alignment