Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HUS69_RS18485 | Genome accession | NZ_CP056073 |
| Coordinates | 3827615..3828055 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain EC50 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3822615..3833055
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUS69_RS18465 (HUS69_18485) | aroP | 3823613..3824986 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| HUS69_RS18470 (HUS69_18490) | ampE | 3825029..3825883 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| HUS69_RS18475 (HUS69_18495) | ampD | 3825880..3826431 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| HUS69_RS18480 (HUS69_18500) | nadC | 3826519..3827412 (+) | 894 | WP_089622681.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HUS69_RS18485 (HUS69_18505) | pilA | 3827615..3828055 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| HUS69_RS18490 (HUS69_18510) | pilB | 3828065..3829450 (+) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| HUS69_RS18495 (HUS69_18515) | hofC | 3829440..3830642 (+) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| HUS69_RS18500 (HUS69_18520) | guaC | 3830677..3831720 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| HUS69_RS18505 (HUS69_18525) | - | 3831876..3831920 (-) | 45 | WP_120795372.1 | protein YacM | - |
| HUS69_RS18510 (HUS69_18530) | coaE | 3831945..3832565 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=403274 HUS69_RS18485 WP_000360904.1 3827615..3828055(+) (pilA) [Escherichia coli strain EC50]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=403274 HUS69_RS18485 WP_000360904.1 3827615..3828055(+) (pilA) [Escherichia coli strain EC50]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |