Detailed information NTG0040325

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: SALIVA_RS08680
• Genome accession: NC_017595
• Coordinates: 1915160..1918480 (-)
• Length: 1106 a.a.
• NCBI ID: WP_014635013.1
• Uniprot ID: -
• Organism: Streptococcus salivarius JIM8777
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1910160..1923480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVA_RS08670 (SALIVA_1771)	-	1910433..1911164 (+)	732	WP_013991143.1	DUF554 domain-containing protein	-
SALIVA_RS08675 (SALIVA_1772)	rexA	1911517..1915170 (-)	3654	WP_014635012.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
SALIVA_RS08680 (SALIVA_1773)	rexB	1915160..1918480 (-)	3321	WP_014635013.1	ATP-dependent nuclease subunit B	Machinery gene
SALIVA_RS08685 (SALIVA_1774)	-	1918728..1920101 (-)	1374	WP_014635014.1	GHKL domain-containing protein	-
SALIVA_RS08690 (SALIVA_1775)	-	1920136..1921446 (-)	1311	WP_014635015.1	hypothetical protein	-
SALIVA_RS08695 (SALIVA_1776)	-	1921727..1923466 (-)	1740	WP_014635016.1	DUF6287 domain-containing protein	-

Sequence

Protein

• Length: 1106 a.a.
• Molecular weight: 126013.32 Da
• Isoelectric Point: 4.8219

>NTDB_id=40325 SALIVA_RS08680 WP_014635013.1 1915160..1918480(-) (rexB) [Streptococcus salivarius JIM8777]
MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPQSASFEITVTRFTQMARYFILNTSNPKTQ
LDDTGLAMIFYKVLSHMGDDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLLRIFSAAQDLLLA
GDFDNQSKLSAFFKEITSGHLDKALDNTVLVIDGFTRFSAEEEALVALLNDKCHQIVIGTYASQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVTPDYVTTDKEGNPSFARISRLLESRHDFSTVDEQLTAQDKQALQVWEVVNQKEEVAQVAKSIRQLLA
DGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEETMSSHPLVQFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYDLDQLNALRSQLVEPLDKLLNSRKQKGSSLLKKLVVFLEAVQVPSQM
ASLTAKASEAEKEQNEQVWKAFTQLLEQVETIFGEETLSVDDFLSILRSGMLACDYRTVPATVDVVNVKKYDLIQPHSAP
YVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEDRSLDIVTQSNSQRGHFVAMSLFNSASEQLVLSQPQILNETQDD
MSVYLKELLDLGLSLVEKGRNRFEAKGDQIGNYKDLLSTVIALNSSHLDADLDKETQTFWSVAVRYLRKRLDKDQVLIPN
VIDDVTTTKVDDQVMQLVFPGEEPLKLSASALTTFYNNQYVYFLRYVLGLEELESIHPDARHHGTYLHRVFERVMGDSSS
ENFDDKLEKAIAQTNQEQPFELLYTEDQESRLSRQILEDIARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRV
DRLTDGALGVVDYKSGKNVFDIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQDPQLNLAQFGLDKLAAQAHK
ELTYKGLFVASETEHLAGGNYDLQKTVTYDKKDLETLLDYNIKLFTSAAEVIRSGNFAVNPYTEDGKSVQGDQIKSITHF
EADRHMGQARKLLRLPSKGKKEAYLELMAKDEDDNEMQVAEKIVPFLVTDQAVTADKKDQEDNHVD

Nucleotide

• Length: 3321 bp

>NTDB_id=40325 SALIVA_RS08680 WP_014635013.1 1915160..1918480(-) (rexB) [Streptococcus salivarius JIM8777]
ATGAAATTACTTTATACGGATATGTCTCAGGATTTAACAGAAATTCTGACGGAGCAGGCAACCAGCTATGCCCAAAAGGG
AAAGAGGGTCTTTTATATTGCCCCTAATGCCCTGTCATTTGAGAAGGAGCGTAAGGTCTTGGAATACCTGCCTCAGTCAG
CATCCTTTGAGATTACGGTGACTCGTTTTACTCAGATGGCGAGATATTTCATTCTCAATACGAGCAACCCCAAAACTCAG
CTGGATGATACTGGTCTGGCCATGATTTTTTATAAGGTGTTGTCGCATATGGGCGATGATGAGCTTAAGGTTTACGGCCG
CTTGCGCAAGGATAGTAACTTTATTAATCAATTGGTAGACCTTTACAAAGAGTTGCAGCAGGCTAATATGACGGTTCTGG
ATTTGCAGCATCTGGATCAGGTTGAAAAGCAAGAGGATTTGCTCAGGATTTTCAGTGCGGCTCAGGATCTCTTGTTGGCA
GGAGATTTTGATAATCAATCAAAACTTAGTGCCTTCTTCAAGGAAATTACCTCAGGCCATCTGGATAAGGCCCTGGATAA
CACGGTTTTGGTCATTGATGGCTTCACGCGTTTTTCTGCTGAGGAGGAGGCCCTAGTTGCCCTCTTGAATGATAAGTGCC
ACCAGATTGTCATTGGGACTTATGCCAGTCAAAAGGCTTATAAGGCTAACTTTGTCTATGGCAATGTTTATCAGGCCTCA
GTCGATTTTTTGAGAACTTTGGCTCAGACCTATAAGGTGACACCCGACTATGTAACGACAGACAAAGAGGGCAATCCTTC
TTTTGCTCGCATTAGCCGTCTTTTGGAGAGCCGTCATGATTTTAGTACGGTAGATGAGCAGCTAACTGCTCAGGACAAGC
AAGCCTTGCAGGTATGGGAAGTGGTCAACCAAAAGGAAGAGGTGGCTCAGGTTGCCAAGAGTATTCGTCAGTTACTAGCA
GATGGCAAGCGCTATAAGGATATCTTGGTCCTGCTTGGTGATGAGGAGAGTTATAAGCTTCAGGTGGGGCAGATTTTCCG
AAAATTTGATATTCCCTATTATTTCGGTAAGGAAGAAACCATGTCTAGCCATCCTTTGGTGCAGTTTGTGGATTCGCTGG
AACGTATCAAGCGCTATAATTATCGTGCTGAGGATTTGCTTAATCTCGTAAAATCCGGTCTCTATGGTGGTTTTGCTCAA
GAGGACTTAGACCTTTTTGAATATTATGTCAATTTTGCAGACATCAAGGGGCGTCACAAGTTCTTGTCTGATTTTACGGC
CAATAGTCGTGATAAGTATGATTTAGACCAGCTTAATGCCTTGCGCTCACAACTGGTAGAGCCCTTGGACAAGTTGCTTA
ATAGTCGCAAACAAAAGGGTTCTAGTCTACTCAAGAAACTAGTGGTCTTTTTAGAGGCTGTGCAAGTGCCAAGCCAAATG
GCTAGTTTGACTGCCAAGGCCAGTGAGGCGGAAAAAGAACAGAACGAACAGGTCTGGAAGGCTTTCACACAACTCTTGGA
GCAGGTTGAGACTATTTTTGGGGAAGAAACACTGTCAGTGGACGACTTTTTGTCCATTTTGCGTTCAGGAATGTTGGCCT
GTGATTACCGTACGGTCCCAGCCACTGTCGATGTGGTCAATGTGAAGAAATACGATTTGATTCAACCACATTCTGCTCCT
TATGTTTTTGCCTTGGGGATGACCCAGTCACATTTTCCAAAAGTAGGTCAAAATAAGAGTCTCCTGTCTGATGAGGAACG
GAGTCGTATCAATGAGGCGACGGATGAAGACAGGAGTTTGGATATTGTTACGCAGAGCAATAGTCAGCGGGGGCATTTTG
TAGCTATGTCACTTTTTAATTCGGCTAGTGAACAATTGGTGCTTAGTCAGCCACAAATTCTCAATGAGACTCAAGATGAC
ATGTCGGTTTATTTGAAAGAGCTGCTAGACCTTGGCCTTTCTTTGGTTGAAAAAGGACGTAATCGTTTCGAGGCTAAGGG
TGACCAGATTGGGAACTACAAGGACCTTCTATCAACTGTCATTGCCCTTAACAGTAGCCATTTAGATGCTGATTTGGATA
AGGAAACGCAGACTTTCTGGTCAGTTGCTGTGCGTTATCTCCGTAAGCGACTTGATAAGGACCAAGTCTTGATTCCAAAT
GTGATTGACGATGTGACGACAACCAAGGTGGATGATCAAGTCATGCAGCTTGTCTTTCCGGGGGAAGAACCACTGAAATT
ATCAGCCTCGGCTTTGACGACCTTTTATAACAACCAATATGTTTATTTCTTGCGTTATGTTTTGGGGCTTGAAGAGTTGG
AGTCCATCCATCCAGATGCTCGACACCACGGGACTTACTTGCACCGTGTCTTTGAGCGTGTTATGGGGGATTCTTCGTCA
GAAAACTTCGATGATAAATTGGAAAAGGCTATTGCTCAGACCAATCAGGAGCAACCCTTTGAACTTCTCTATACAGAGGA
CCAAGAGAGTCGCTTGTCTCGTCAGATTTTAGAAGATATCGCCCGTTCAACTGCCAGTGTTTTGCGTGACAATGCGGCTG
TTAAGGTTGAGCGTGAGGAAGCCAAGTTTGATTTGCTTTTAGCAAATAGCATCAAGATTACAGGGATTATTGACCGTGTG
GATCGTTTAACGGATGGGGCTCTGGGTGTCGTTGACTATAAGTCAGGCAAAAATGTCTTTGACATTCAGAAATTCTACAA
TGGCCTCAGCCCACAGTTGGTAACCTATCTAGAAGCCCTTCGCCAAACCTATAAGGTTGATGCTGATCAGCTTTTTGGTG
CCATGTATCTTCACATGCAGGACCCACAGCTTAACTTAGCTCAGTTTGGTCTGGACAAGCTAGCAGCTCAGGCTCATAAG
GAATTGACCTATAAGGGACTTTTTGTGGCTTCAGAAACAGAGCATCTAGCTGGTGGAAACTATGATTTGCAAAAGACTGT
CACCTATGACAAGAAGGACCTAGAAACCTTGCTAGACTACAATATCAAGCTCTTTACAAGTGCTGCTGAGGTTATTCGAA
GCGGGAATTTTGCGGTCAATCCTTATACTGAGGATGGCAAGTCTGTTCAAGGGGATCAAATCAAGTCTATTACTCATTTT
GAGGCCGACCGCCACATGGGACAGGCGCGAAAACTCTTGCGTTTACCAAGTAAGGGCAAGAAGGAAGCCTATTTGGAGCT
GATGGCAAAAGATGAGGACGATAATGAGATGCAAGTTGCTGAAAAAATCGTCCCCTTTCTAGTCACTGATCAAGCTGTGA
CAGCAGACAAAAAAGACCAGGAGGACAACCATGTTGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (747-1023)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	43.71	98.463	0.43