Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   GL185_RS09520 Genome accession   NZ_CP046357
Coordinates   1868576..1869286 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain 525     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1863576..1874286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL185_RS09495 (GL185_09640) amiE 1863597..1864664 (+) 1068 WP_000159556.1 ABC transporter ATP-binding protein Regulator
  GL185_RS09500 (GL185_09645) amiF 1864675..1865601 (+) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator
  GL185_RS09505 (GL185_09650) - 1866091..1866822 (+) 732 WP_162489596.1 ABC transporter substrate-binding protein -
  GL185_RS09510 (GL185_09655) - 1866834..1867727 (+) 894 WP_024477718.1 ABC transporter permease -
  GL185_RS09515 (GL185_09660) - 1867740..1868543 (+) 804 WP_024477717.1 ATP-binding cassette domain-containing protein -
  GL185_RS09520 (GL185_09665) treR 1868576..1869286 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  GL185_RS09525 (GL185_09670) treP 1869471..1871438 (+) 1968 WP_197097761.1 PTS system trehalose-specific EIIBC component -
  GL185_RS09530 (GL185_09675) treC 1871616..1873241 (+) 1626 WP_016398080.1 alpha,alpha-phosphotrehalase -
  GL185_RS09535 (GL185_09680) - 1873497..1873745 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=403217 GL185_RS09520 WP_000760673.1 1868576..1869286(-) (treR) [Streptococcus pneumoniae strain 525]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=403217 GL185_RS09520 WP_000760673.1 1868576..1869286(-) (treR) [Streptococcus pneumoniae strain 525]
ATGAAAAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTTCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment