Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   GL185_RS09025 Genome accession   NZ_CP046357
Coordinates   1786059..1787096 (+) Length   345 a.a.
NCBI ID   WP_000727276.1    Uniprot ID   A0AAQ2ZXI6
Organism   Streptococcus pneumoniae strain 525     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1781059..1792096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL185_RS08990 (GL185_09145) yidC 1781094..1782020 (-) 927 WP_000835948.1 membrane protein insertase YidC -
  GL185_RS08995 (GL185_09150) - 1782098..1782376 (-) 279 WP_001174613.1 acylphosphatase -
  GL185_RS09000 (GL185_09155) - 1782410..1783150 (+) 741 WP_000152701.1 RNA methyltransferase -
  GL185_RS09005 (GL185_09160) - 1783206..1783889 (+) 684 WP_001016913.1 Bax inhibitor-1/YccA family protein -
  GL185_RS09010 (GL185_09165) asnA 1784001..1784993 (+) 993 WP_000747993.1 aspartate--ammonia ligase -
  GL185_RS09015 (GL185_09170) rsmD 1785058..1785597 (+) 540 WP_000706962.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  GL185_RS09020 (GL185_09175) coaD 1785587..1786075 (+) 489 WP_001280742.1 pantetheine-phosphate adenylyltransferase -
  GL185_RS09025 (GL185_09180) sepM 1786059..1787096 (+) 1038 WP_000727276.1 SepM family pheromone-processing serine protease Regulator
  GL185_RS09030 (GL185_09185) - 1787154..1787384 (+) 231 WP_000250392.1 DUF1146 family protein -
  GL185_RS09035 (GL185_09190) murA 1787408..1788691 (+) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GL185_RS09040 (GL185_09195) - 1788684..1788872 (+) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  GL185_RS09045 (GL185_09200) endA 1788911..1789735 (+) 825 WP_001036786.1 DNA-entry nuclease EndA Machinery gene
  GL185_RS09050 (GL185_09205) - 1790026..1791357 (+) 1332 WP_016398203.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37553.61 Da        Isoelectric Point: 5.0724

>NTDB_id=403205 GL185_RS09025 WP_000727276.1 1786059..1787096(+) (sepM) [Streptococcus pneumoniae strain 525]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHLDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=403205 GL185_RS09025 WP_000727276.1 1786059..1787096(+) (sepM) [Streptococcus pneumoniae strain 525]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCTGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588


Multiple sequence alignment