Detailed information NTG0403136

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HUW39_RS00880
• Genome accession: NZ_CP056036
• Coordinates: 201780..202763 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC31
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 196780..207763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW39_RS00865 (HUW39_00865)	dppA	198080..199687 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
HUW39_RS00870 (HUW39_00870)	dppB	199838..200857 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
HUW39_RS00875 (HUW39_00875)	dppC	200867..201769 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HUW39_RS00880 (HUW39_00880)	amiE	201780..202763 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HUW39_RS00885 (HUW39_00885)	dppF	202760..203764 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HUW39_RS00890 (HUW39_00890)	yhjV	203794..205065 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
HUW39_RS00895 (HUW39_00895)	-	205541..205648 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUW39_RS00900 (HUW39_00900)	-	206024..206131 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=403136 HUW39_RS00880 WP_001196486.1 201780..202763(+) (amiE) [Escherichia coli strain EC31]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=403136 HUW39_RS00880 WP_001196486.1 201780..202763(+) (amiE) [Escherichia coli strain EC31]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404