Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GLO74_RS10860 Genome accession   NZ_CP046354
Coordinates   2119913..2120671 (-) Length   252 a.a.
NCBI ID   WP_000410383.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 310     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2114913..2125671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GLO74_RS10835 (GLO74_11040) pth 2114945..2115514 (-) 570 WP_000163930.1 aminoacyl-tRNA hydrolase -
  GLO74_RS10840 (GLO74_11045) ychF 2115586..2116701 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  GLO74_RS10845 (GLO74_11050) - 2116785..2116979 (-) 195 WP_000285194.1 DUF951 domain-containing protein -
  GLO74_RS10850 (GLO74_11055) dnaN 2117044..2118180 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  GLO74_RS10855 (GLO74_11060) dnaA 2118339..2119700 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  GLO74_RS10860 (GLO74_11065) spo0J 2119913..2120671 (-) 759 WP_000410383.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=402992 GLO74_RS10860 WP_000410383.1 2119913..2120671(-) (spo0J) [Streptococcus pneumoniae strain 310]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=402992 GLO74_RS10860 WP_000410383.1 2119913..2120671(-) (spo0J) [Streptococcus pneumoniae strain 310]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
GCTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504


Multiple sequence alignment