Detailed information NTG0402952

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HUU83_RS21470
• Genome accession: NZ_CP055251
• Coordinates: 4446850..4447833 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain AH01
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4441850..4452833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUU83_RS21445 (HUU83_21445)	-	4442999..4443106 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUU83_RS21450 (HUU83_21450)	-	4443482..4443589 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUU83_RS21455 (HUU83_21455)	-	4443965..4444072 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUU83_RS21460 (HUU83_21460)	yhjV	4444548..4445819 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
HUU83_RS21465 (HUU83_21465)	dppF	4445849..4446853 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HUU83_RS21470 (HUU83_21470)	amiE	4446850..4447833 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
HUU83_RS21475 (HUU83_21475)	dppC	4447844..4448746 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HUU83_RS21480 (HUU83_21480)	dppB	4448756..4449775 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HUU83_RS21485 (HUU83_21485)	dppA	4449926..4451533 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=402952 HUU83_RS21470 WP_001196496.1 4446850..4447833(-) (amiE) [Escherichia coli strain AH01]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=402952 HUU83_RS21470 WP_001196496.1 4446850..4447833(-) (amiE) [Escherichia coli strain AH01]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401