Detailed information NTG0402887

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOC30_RS25770
• Genome accession: NZ_CP046346
• Coordinates: 2478915..2480057 (-)
• Length: 380 a.a.
• NCBI ID: WP_006416170.1
• Uniprot ID: A0A0H3KRG3
• Organism: Burkholderia multivorans strain FDAARGOS_722
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2473915..2485057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC30_RS25750 (FOC30_25740)	-	2474494..2474877 (+)	384	WP_006398232.1	nuclear transport factor 2 family protein	-
FOC30_RS25755 (FOC30_25745)	leuA	2475013..2476659 (-)	1647	WP_012212682.1	2-isopropylmalate synthase	-
FOC30_RS25760 (FOC30_25750)	ybiB	2477052..2478023 (-)	972	WP_006398234.1	DNA-binding protein YbiB	-
FOC30_RS25765 (FOC30_25755)	maiA	2478197..2478841 (+)	645	WP_105773752.1	maleylacetoacetate isomerase	-
FOC30_RS25770 (FOC30_25760)	pilA	2478915..2480057 (-)	1143	WP_006416170.1	signal recognition particle-docking protein FtsY	Machinery gene
FOC30_RS25775 (FOC30_25765)	rsmD	2480271..2480885 (+)	615	WP_105773751.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOC30_RS25780 (FOC30_25770)	coaD	2480997..2481494 (+)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
FOC30_RS25785 (FOC30_25775)	-	2481816..2482079 (+)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOC30_RS25790 (FOC30_25780)	hisC	2482148..2483215 (-)	1068	WP_105773750.1	histidinol-phosphate transaminase	-
FOC30_RS25795 (FOC30_25785)	pth	2483352..2483951 (-)	600	WP_006398241.1	aminoacyl-tRNA hydrolase	-
FOC30_RS25800 (FOC30_25790)	-	2484060..2484665 (-)	606	WP_155822715.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40336.19 Da
• Isoelectric Point: 4.9462

>NTDB_id=402887 FOC30_RS25770 WP_006416170.1 2478915..2480057(-) (pilA) [Burkholderia multivorans strain FDAARGOS_722]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=402887 FOC30_RS25770 WP_006416170.1 2478915..2480057(-) (pilA) [Burkholderia multivorans strain FDAARGOS_722]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCCGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTGA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGACGCA
TCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACGGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCCGGCGTCGACGCGACCGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGTGGGCCGTCTCACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTCAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGTCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAGGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

3D structure

• AlphaFold DB: A0A0H3KRG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589