Detailed information NTG0402872

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HVV27_RS08395
• Genome accession: NZ_CP055246
• Coordinates: 1678050..1679318 (+)
• Length: 422 a.a.
• NCBI ID: WP_011018264.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY767
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1673050..1684318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HVV27_RS08380 (HVV27_08380)	-	1673503..1675476 (+)	1974	WP_011529042.1	amidase family protein	-
HVV27_RS08385 (HVV27_08385)	pabB	1675661..1677418 (+)	1758	WP_021299283.1	aminodeoxychorismate synthase component I	-
HVV27_RS08390 (HVV27_08390)	-	1677451..1678017 (+)	567	WP_011529044.1	aminodeoxychorismate/anthranilate synthase component II	-
HVV27_RS08395 (HVV27_08395)	rarA	1678050..1679318 (+)	1269	WP_011018264.1	replication-associated recombination protein A	Machinery gene
HVV27_RS08410 (HVV27_08410)	-	1679817..1680257 (+)	441	WP_042769804.1	GNAT family N-acetyltransferase	-
HVV27_RS08415 (HVV27_08415)	-	1680312..1680818 (+)	507	WP_011529046.1	DNA topology modulation protein	-
HVV27_RS08420 (HVV27_08420)	smeZ	1681067..1681768 (+)	702	WP_011529047.1	streptococcal mitogenic exotoxin SmeZ	-
HVV27_RS08425 (HVV27_08425)	-	1682095..1682319 (-)	225	WP_011529048.1	hypothetical protein	-
HVV27_RS08430 (HVV27_08430)	-	1682496..1684124 (+)	1629	WP_021299280.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46671.15 Da
• Isoelectric Point: 6.3774

>NTDB_id=402872 HVV27_RS08395 WP_011018264.1 1678050..1679318(+) (rarA) [Streptococcus pyogenes strain TSPY767]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=402872 HVV27_RS08395 WP_011018264.1 1678050..1679318(+) (rarA) [Streptococcus pyogenes strain TSPY767]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.569	99.052	0.59