Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HVV27_RS00630 | Genome accession | NZ_CP055246 |
| Coordinates | 102077..102361 (+) | Length | 94 a.a. |
| NCBI ID | WP_011528162.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain TSPY767 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 97077..107361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVV27_RS00605 (HVV27_00600) | - | 99023..99388 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| HVV27_RS00610 (HVV27_00605) | comGA | 99481..100419 (+) | 939 | WP_002987773.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HVV27_RS00615 (HVV27_00610) | comGB | 100355..101389 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HVV27_RS00620 (HVV27_00615) | comGC | 101391..101717 (+) | 327 | WP_011528161.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HVV27_RS00625 (HVV27_00620) | comGD | 101692..102120 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HVV27_RS00630 (HVV27_00625) | comGE | 102077..102361 (+) | 285 | WP_011528162.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HVV27_RS00635 (HVV27_00630) | comGF | 102354..102788 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HVV27_RS00640 (HVV27_00635) | comGG | 102772..103098 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| HVV27_RS00645 (HVV27_00640) | comGH | 103196..104149 (+) | 954 | WP_021299429.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HVV27_RS00650 (HVV27_00645) | - | 104208..105404 (+) | 1197 | WP_011528164.1 | acetate kinase | - |
| HVV27_RS00655 (HVV27_00650) | - | 105591..105899 (+) | 309 | WP_011528165.1 | hypothetical protein | - |
| HVV27_RS00660 (HVV27_00655) | proC | 105982..106752 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10686.65 Da Isoelectric Point: 8.9043
>NTDB_id=402799 HVV27_RS00630 WP_011528162.1 102077..102361(+) (comGE) [Streptococcus pyogenes strain TSPY767]
MGIIKKQVKAYIALESMIATGILFSIVILILSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILILSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=402799 HVV27_RS00630 WP_011528162.1 102077..102361(+) (comGE) [Streptococcus pyogenes strain TSPY767]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCATCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAT
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCATCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAT
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |
| comGE | Streptococcus mutans UA140 |
36.559 |
98.936 |
0.362 |
| comGE | Streptococcus mutans UA159 |
36.559 |
98.936 |
0.362 |