Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FOB83_RS06080 | Genome accession | NZ_CP046331 |
| Coordinates | 1136388..1137650 (+) | Length | 420 a.a. |
| NCBI ID | WP_029306758.1 | Uniprot ID | - |
| Organism | Cupriavidus metallidurans strain FDAARGOS_675 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1131388..1142650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB83_RS06055 (FOB83_06055) | - | 1131675..1131935 (-) | 261 | WP_008650933.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| FOB83_RS06060 (FOB83_06060) | coaD | 1132002..1132487 (-) | 486 | WP_011515175.1 | pantetheine-phosphate adenylyltransferase | - |
| FOB83_RS06065 (FOB83_06065) | rsmD | 1132699..1133331 (-) | 633 | WP_011515174.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FOB83_RS06070 (FOB83_06070) | - | 1133440..1134804 (-) | 1365 | WP_011515173.1 | M16 family metallopeptidase | - |
| FOB83_RS06075 (FOB83_06075) | - | 1134813..1136327 (-) | 1515 | WP_011515172.1 | M16 family metallopeptidase | - |
| FOB83_RS06080 (FOB83_06080) | pilA | 1136388..1137650 (+) | 1263 | WP_029306758.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FOB83_RS06085 (FOB83_06085) | maiA | 1137722..1138369 (-) | 648 | WP_011515169.1 | maleylacetoacetate isomerase | - |
| FOB83_RS06090 (FOB83_06090) | - | 1138374..1139075 (-) | 702 | WP_029306759.1 | fumarylacetoacetate hydrolase family protein | - |
| FOB83_RS06095 (FOB83_06095) | - | 1139250..1139885 (+) | 636 | WP_024569516.1 | ANTAR domain-containing response regulator | - |
| FOB83_RS06100 (FOB83_06100) | - | 1140249..1141553 (+) | 1305 | WP_011515166.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| FOB83_RS06105 (FOB83_06105) | ntrB | 1141664..1142533 (+) | 870 | WP_049799764.1 | nitrate ABC transporter permease | - |
Sequence
Protein
Download Length: 420 a.a. Molecular weight: 44097.19 Da Isoelectric Point: 6.9898
>NTDB_id=402756 FOB83_RS06080 WP_029306758.1 1136388..1137650(+) (pilA) [Cupriavidus metallidurans strain FDAARGOS_675]
MFSFWKKRKAEPAPESVEPPAAAPTPAPAPAPAPLPAPAPAAAPAVTPVAPPVAAPVATPVSAPASTPAPVPTPAPSPVH
VAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG
MFSFWKKRKAEPAPESVEPPAAAPTPAPAPAPAPLPAPAPAAAPAVTPVAPPVAAPVATPVSAPASTPAPVPTPAPSPVH
VAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG
Nucleotide
Download Length: 1263 bp
>NTDB_id=402756 FOB83_RS06080 WP_029306758.1 1136388..1137650(+) (pilA) [Cupriavidus metallidurans strain FDAARGOS_675]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCCGAATCGGTCGAGCCGCCCGCGGCCGCCCCCACACCGGC
GCCTGCTCCCGCGCCGGCCCCGCTTCCCGCCCCCGCCCCGGCTGCGGCACCTGCGGTAACCCCTGTCGCCCCCCCTGTAG
CGGCACCCGTTGCAACCCCGGTTTCGGCCCCGGCTTCAACACCTGCGCCAGTTCCAACGCCCGCCCCGTCGCCGGTCCAT
GTGGCGCCACCCGTGGCGCCTCCGGTCGTGCCGCCCGTGGCGTCGGCTCCGCCTCCGGCCAGCTATACGCCGCCGGTCAT
CGAGGAGCTGGAGCTGACCCCGCCGCCCGCGCAAACCGCCGAAGCCAAGCGCGGCTGGATGTCGCGGCTGCGTGCCGGCC
TGTCGAAGACCAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAACTGGAAACA
GCGCTGCTGATGGCCGATGCCGGAGTGGAGGCCACCGAGTACCTGCTGGGCGAACTGCGCCGCCGCATCAAGAATGATCG
TATCGAAACGGCCGAAGGCGTGAAGGCCGCGCTCAAGGATCTGCTGACGCAGCTGCTCAAGCCGCTCGAGAAGACGATGG
AACTGGGCCGCGAGCAGCCGCTGGTGATGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGTAAGCTC
TGCAAGCATTTCCAGTCCTATCACCAGTCCGTGCTGCTGGCCGCCGGCGACACATTCCGCGCCGCCGCGCGCGAACAACT
CACGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCCCAGGAAAGTGGCGACCCAGCCGCCGTGATCTTCGATGCCG
TCAACGCGGCGCGCGCGCGCAAGATCGACATCGTGATGGCAGATACCGCTGGCCGCCTGCCCACGCAGCTTCACCTGATG
GAGGAACTCAAGAAGGTCAAGCGCGTGATCGGCAAGTCGATGCCGACCGCACCGCATGAAGTGCTGCTTGTGATCGACGC
CAATACTGGTCAGAACGCACTGGCCCAGACGCGCGCGTTCGATGACGCGCTCGGCCTGACCGGCCTGATCGTGACCAAGC
TCGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGTCCGGTACCGGTGTACTTCATCGGCGTGGGC
GAGAAGGTCGAGGACCTGCAGCCGTTCAAGGCGGACGAGTTCGCCGAGGCGCTGCTGGGCTGA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCCGAATCGGTCGAGCCGCCCGCGGCCGCCCCCACACCGGC
GCCTGCTCCCGCGCCGGCCCCGCTTCCCGCCCCCGCCCCGGCTGCGGCACCTGCGGTAACCCCTGTCGCCCCCCCTGTAG
CGGCACCCGTTGCAACCCCGGTTTCGGCCCCGGCTTCAACACCTGCGCCAGTTCCAACGCCCGCCCCGTCGCCGGTCCAT
GTGGCGCCACCCGTGGCGCCTCCGGTCGTGCCGCCCGTGGCGTCGGCTCCGCCTCCGGCCAGCTATACGCCGCCGGTCAT
CGAGGAGCTGGAGCTGACCCCGCCGCCCGCGCAAACCGCCGAAGCCAAGCGCGGCTGGATGTCGCGGCTGCGTGCCGGCC
TGTCGAAGACCAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAACTGGAAACA
GCGCTGCTGATGGCCGATGCCGGAGTGGAGGCCACCGAGTACCTGCTGGGCGAACTGCGCCGCCGCATCAAGAATGATCG
TATCGAAACGGCCGAAGGCGTGAAGGCCGCGCTCAAGGATCTGCTGACGCAGCTGCTCAAGCCGCTCGAGAAGACGATGG
AACTGGGCCGCGAGCAGCCGCTGGTGATGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGTAAGCTC
TGCAAGCATTTCCAGTCCTATCACCAGTCCGTGCTGCTGGCCGCCGGCGACACATTCCGCGCCGCCGCGCGCGAACAACT
CACGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCCCAGGAAAGTGGCGACCCAGCCGCCGTGATCTTCGATGCCG
TCAACGCGGCGCGCGCGCGCAAGATCGACATCGTGATGGCAGATACCGCTGGCCGCCTGCCCACGCAGCTTCACCTGATG
GAGGAACTCAAGAAGGTCAAGCGCGTGATCGGCAAGTCGATGCCGACCGCACCGCATGAAGTGCTGCTTGTGATCGACGC
CAATACTGGTCAGAACGCACTGGCCCAGACGCGCGCGTTCGATGACGCGCTCGGCCTGACCGGCCTGATCGTGACCAAGC
TCGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGTCCGGTACCGGTGTACTTCATCGGCGTGGGC
GAGAAGGTCGAGGACCTGCAGCCGTTCAAGGCGGACGAGTTCGCCGAGGCGCTGCTGGGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
49.533 |
100 |
0.505 |