Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FOB91_RS09435 Genome accession   NZ_CP046328
Coordinates   1953030..1954085 (+) Length   351 a.a.
NCBI ID   WP_012000042.1    Uniprot ID   A8AVP5
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1948030..1959085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS09405 (FOB91_09405) tsaE 1949198..1949644 (+) 447 WP_041789558.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FOB91_RS09410 (FOB91_09410) - 1949644..1950168 (+) 525 WP_041789560.1 GNAT family N-acetyltransferase -
  FOB91_RS09415 (FOB91_09415) brpA 1950175..1951386 (+) 1212 WP_012000039.1 biofilm formation/cell division transcriptional regulator BrpA -
  FOB91_RS09420 (FOB91_09420) - 1951434..1951736 (-) 303 WP_012000040.1 hypothetical protein -
  FOB91_RS09425 (FOB91_09425) - 1951747..1952163 (-) 417 WP_041789561.1 HIT family protein -
  FOB91_RS09430 (FOB91_09430) pptA 1952302..1953033 (+) 732 WP_008808542.1 ABC transporter ATP-binding protein Regulator
  FOB91_RS09435 (FOB91_09435) pptB 1953030..1954085 (+) 1056 WP_012000042.1 ABC transporter permease Regulator
  FOB91_RS09440 (FOB91_09440) ccrZ 1954126..1954920 (+) 795 WP_008808544.1 cell cycle regulator CcrZ -
  FOB91_RS09445 (FOB91_09445) trmB 1954917..1955555 (+) 639 WP_012000043.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FOB91_RS09450 (FOB91_09450) rimP 1955664..1956152 (+) 489 WP_012000044.1 ribosome maturation factor RimP -
  FOB91_RS09455 (FOB91_09455) nusA 1956198..1957439 (+) 1242 WP_012000045.1 transcription termination factor NusA -
  FOB91_RS09460 (FOB91_09460) rnpM 1957450..1957746 (+) 297 WP_008808548.1 RNase P modulator RnpM -
  FOB91_RS09465 (FOB91_09465) - 1957739..1958038 (+) 300 WP_012000046.1 YlxQ-related RNA-binding protein -
  FOB91_RS10865 - 1958056..1958179 (+) 124 Protein_1837 translation initiation factor IF-2 N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 41280.70 Da        Isoelectric Point: 10.2754

>NTDB_id=402713 FOB91_RS09435 WP_012000042.1 1953030..1954085(+) (pptB) [Streptococcus gordonii strain FDAARGOS_683]
MREVFTKRRLDFRNQCVKYLRYVLNDHFVLFLMVFLGFTAVQYSQLLRNFPKNHLPIWLALVLLSLGLVFMGRIATYLEK
PDSLFLLAKEEEVHIYVGKQRRNSFILWGFLQTLALLILAPLFLALGVPIWGFTLYCLFLFALKALVFQWKSKKFYLQEG
LDWKSLIAYEERRKQRILQFFALFTNVKGISSSVKRRAYLDFLTNRLSKNQEKVWDNLFLRSYLRNGDFFALSLRLLILS
LLIIIFLPQSMIATIFVGLFQYLLLFQLLALYDAYDYQYLIKLFPLEESAKVKGAKRVITSIGAVVLLVELLAALLFFKE
KIMVLFILLVYLILYAVYLPYKLKGLVDERA

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=402713 FOB91_RS09435 WP_012000042.1 1953030..1954085(+) (pptB) [Streptococcus gordonii strain FDAARGOS_683]
ATGAGAGAAGTATTTACTAAGCGCAGACTGGATTTTCGGAACCAGTGTGTAAAATATCTGCGCTATGTTCTGAATGACCA
CTTTGTTCTATTTTTAATGGTTTTCTTGGGTTTTACAGCGGTTCAATACAGCCAATTGCTTCGCAATTTTCCTAAGAATC
ATTTGCCTATCTGGCTAGCCTTAGTCCTCCTATCACTGGGATTGGTTTTTATGGGCAGGATTGCTACCTATCTTGAAAAG
CCAGATAGCCTCTTTCTTTTGGCTAAGGAAGAAGAAGTACATATCTATGTCGGCAAACAAAGGCGAAATTCTTTTATTCT
TTGGGGATTTTTGCAAACCTTGGCTTTGCTTATCTTGGCTCCTCTTTTTCTAGCCTTAGGTGTGCCTATATGGGGCTTTA
CTCTATATTGTTTGTTCCTATTTGCTTTGAAAGCTCTGGTATTTCAATGGAAAAGTAAGAAATTCTATTTGCAGGAAGGG
CTTGATTGGAAGTCTCTAATTGCCTACGAAGAGAGACGTAAACAGCGAATTTTGCAATTTTTTGCTCTTTTTACGAATGT
TAAGGGAATATCAAGTAGTGTAAAAAGACGAGCTTATTTAGATTTCTTGACCAACCGCCTGTCCAAGAATCAAGAGAAAG
TTTGGGACAATCTCTTCTTGCGTTCTTATTTGAGAAATGGGGACTTTTTTGCCCTTAGCCTACGTTTGTTGATTTTATCA
TTGCTGATTATTATTTTTCTACCACAAAGCATGATTGCAACAATCTTTGTCGGTCTTTTTCAATATCTCTTGCTCTTTCA
GCTTCTAGCCTTGTATGATGCTTATGATTATCAATATTTAATCAAACTCTTCCCTCTAGAGGAAAGTGCAAAGGTAAAAG
GAGCTAAACGAGTTATCACTAGCATTGGGGCAGTCGTATTGCTCGTAGAATTATTGGCAGCTCTGCTATTTTTTAAAGAA
AAAATAATGGTCCTTTTTATCCTGCTTGTATACCTGATACTTTATGCAGTTTATCTGCCTTATAAGCTTAAAGGATTGGT
TGACGAAAGGGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A8AVP5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

49.138

99.145

0.487

  pptB Streptococcus thermophilus LMD-9

48.851

99.145

0.484


Multiple sequence alignment