Detailed information NTG0402616

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: FOC43_RS02245
• Genome accession: NZ_CP046317
• Coordinates: 449986..450723 (-)
• Length: 245 a.a.
• NCBI ID: WP_002834520.1
• Uniprot ID: -
• Organism: Campylobacter coli strain FDAARGOS_735
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 444986..455723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC43_RS02205 (FOC43_02205)	-	445099..445860 (+)	762	WP_025431509.1	ATP-binding protein	-
FOC43_RS02210 (FOC43_02210)	-	445857..446540 (+)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
FOC43_RS02215 (FOC43_02215)	thiD	446540..447352 (+)	813	WP_002797568.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
FOC43_RS02220 (FOC43_02220)	thiE	447342..447974 (+)	633	WP_002834515.1	thiamine phosphate synthase	-
FOC43_RS02225 (FOC43_02225)	-	447952..448581 (+)	630	WP_002777119.1	uroporphyrinogen-III synthase	-
FOC43_RS02230 (FOC43_02230)	-	448574..449026 (-)	453	WP_002777117.1	hypothetical protein	-
FOC43_RS02235 (FOC43_02235)	-	449023..449691 (-)	669	WP_002797569.1	hypothetical protein	-
FOC43_RS02240 (FOC43_02240)	ctsT	449684..449989 (-)	306	WP_002834517.1	hypothetical protein	Machinery gene
FOC43_RS02245 (FOC43_02245)	proC	449986..450723 (-)	738	WP_002834520.1	pyrroline-5-carboxylate reductase	Machinery gene
FOC43_RS02250 (FOC43_02250)	fliW	450723..451112 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
FOC43_RS02255 (FOC43_02255)	-	451276..451923 (+)	648	WP_002777091.1	outer membrane protein assembly factor BamD	-
FOC43_RS02260 (FOC43_02260)	lon	451939..454314 (+)	2376	WP_002783351.1	endopeptidase La	-
FOC43_RS02265 (FOC43_02265)	rpsR	454370..454630 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
FOC43_RS02270 (FOC43_02270)	-	454641..455189 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
FOC43_RS02275 (FOC43_02275)	rpsF	455198..455575 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26796.25 Da
• Isoelectric Point: 9.5957

>NTDB_id=402616 FOC43_RS02245 WP_002834520.1 449986..450723(-) (proC) [Campylobacter coli strain FDAARGOS_735]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYKLNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=402616 FOC43_RS02245 WP_002834520.1 449986..450723(-) (proC) [Campylobacter coli strain FDAARGOS_735]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATAAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	81.25	97.959	0.796