Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FOC54_RS10995 | Genome accession | NZ_CP046306 |
| Coordinates | 2145480..2146454 (+) | Length | 324 a.a. |
| NCBI ID | WP_155975638.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_746 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2140480..2151454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC54_RS10960 (FOC54_10960) | rpmG | 2140943..2141092 (+) | 150 | WP_002449881.1 | 50S ribosomal protein L33 | - |
| FOC54_RS10965 (FOC54_10965) | - | 2141300..2141851 (+) | 552 | WP_064206831.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| FOC54_RS10970 (FOC54_10970) | - | 2141851..2143308 (+) | 1458 | WP_155975634.1 | rhomboid family protein | - |
| FOC54_RS10975 (FOC54_10975) | - | 2143292..2143495 (+) | 204 | WP_037555982.1 | YqgQ family protein | - |
| FOC54_RS10980 (FOC54_10980) | - | 2143492..2144478 (+) | 987 | WP_155975636.1 | ROK family glucokinase | - |
| FOC54_RS10985 (FOC54_10985) | - | 2144478..2144801 (+) | 324 | WP_002449910.1 | MTH1187 family thiamine-binding protein | - |
| FOC54_RS10990 (FOC54_10990) | - | 2144803..2145429 (+) | 627 | WP_002449717.1 | MBL fold metallo-hydrolase | - |
| FOC54_RS10995 (FOC54_10995) | comGA | 2145480..2146454 (+) | 975 | WP_155975638.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FOC54_RS11000 (FOC54_11000) | comGB | 2146426..2147490 (+) | 1065 | WP_370597075.1 | competence type IV pilus assembly protein ComGB | - |
| FOC54_RS11005 (FOC54_11005) | comGC | 2147510..2147821 (+) | 312 | WP_002449700.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FOC54_RS11010 (FOC54_11010) | comGD | 2147811..2148245 (+) | 435 | WP_002449773.1 | competence type IV pilus minor pilin ComGD | - |
| FOC54_RS11015 (FOC54_11015) | - | 2148437..2148934 (+) | 498 | WP_087436200.1 | competence protein ComG | - |
| FOC54_RS11025 (FOC54_11025) | - | 2149099..2149608 (+) | 510 | WP_002449809.1 | shikimate kinase | - |
| FOC54_RS11030 (FOC54_11030) | gcvT | 2149801..2150892 (+) | 1092 | WP_002488553.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36969.95 Da Isoelectric Point: 8.2269
>NTDB_id=402491 FOC54_RS10995 WP_155975638.1 2145480..2146454(+) (comGA) [Staphylococcus hominis strain FDAARGOS_746]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDISTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDISTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=402491 FOC54_RS10995 WP_155975638.1 2145480..2146454(+) (comGA) [Staphylococcus hominis strain FDAARGOS_746]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATATATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTATCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAGTATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATATATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTATCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAGTATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.444 |
100 |
0.694 |
| comGA | Staphylococcus aureus N315 |
69.444 |
100 |
0.694 |