Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   FOC54_RS09415 Genome accession   NZ_CP046306
Coordinates   1849402..1850436 (+) Length   344 a.a.
NCBI ID   WP_049415634.1    Uniprot ID   A0A974KWJ9
Organism   Staphylococcus hominis strain FDAARGOS_746     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1844402..1855436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC54_RS09390 (FOC54_09390) - 1845095..1846084 (-) 990 WP_115344796.1 FUSC family protein -
  FOC54_RS09395 (FOC54_09395) map 1846258..1847010 (+) 753 WP_002450057.1 type I methionyl aminopeptidase -
  FOC54_RS09400 (FOC54_09400) - 1847059..1848069 (-) 1011 WP_155975538.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  FOC54_RS09405 (FOC54_09405) - 1848297..1848683 (+) 387 WP_002450072.1 hypothetical protein -
  FOC54_RS09410 (FOC54_09410) liaF 1848704..1849405 (+) 702 WP_002450089.1 cell wall-active antibiotics response protein LiaF -
  FOC54_RS09415 (FOC54_09415) vraS 1849402..1850436 (+) 1035 WP_049415634.1 sensor histidine kinase Regulator
  FOC54_RS09420 (FOC54_09420) vraR 1850438..1851067 (+) 630 WP_155975539.1 two-component system response regulator VraR Regulator
  FOC54_RS09425 (FOC54_09425) - 1851147..1852355 (-) 1209 WP_002450069.1 YihY/virulence factor BrkB family protein -
  FOC54_RS09430 (FOC54_09430) - 1852447..1852728 (-) 282 WP_002450075.1 hypothetical protein -
  FOC54_RS09435 (FOC54_09435) - 1852734..1853198 (-) 465 WP_049335620.1 low molecular weight protein-tyrosine-phosphatase -
  FOC54_RS09440 (FOC54_09440) - 1853340..1853546 (+) 207 WP_002450082.1 DUF1128 domain-containing protein -
  FOC54_RS09445 (FOC54_09445) - 1853558..1854805 (+) 1248 WP_155975540.1 aminopeptidase -
  FOC54_RS09450 (FOC54_09450) - 1854838..1855371 (+) 534 WP_002488082.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39629.22 Da        Isoelectric Point: 6.3137

>NTDB_id=402481 FOC54_RS09415 WP_049415634.1 1849402..1850436(+) (vraS) [Staphylococcus hominis strain FDAARGOS_746]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQKLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=402481 FOC54_RS09415 WP_049415634.1 1849402..1850436(+) (vraS) [Staphylococcus hominis strain FDAARGOS_746]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACATGCCATTGAAGGTGAAACGGTAGGGATTAATGATAAAAACATAGAACTATATAATGAGACGATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGAAATTAAGAATTAAAACTCAAAATTTAACAAATGAAAACTATA
ATATGAATGACATTAAAGTTAAAAAAATCATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAACTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGCTATCAGCGATAAAAGAAACAGAACTAGCACCACCTCTTAATCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTATTACTACATTTGCGACCTTTAGGACTCAAAG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTTCCTAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTAATGGAACTAAAGTGACAGTAGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAGGATAATGGTAAAG
GTTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTTTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

90.116

100

0.901


Multiple sequence alignment