Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FOC54_RS06205 Genome accession   NZ_CP046306
Coordinates   1222091..1222756 (+) Length   221 a.a.
NCBI ID   WP_002488207.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FDAARGOS_746     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217091..1227756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC54_RS06190 (FOC54_06190) - 1218911..1219189 (+) 279 WP_065581104.1 hypothetical protein -
  FOC54_RS06195 (FOC54_06195) - 1219351..1219452 (+) 102 WP_071859546.1 SE2200 family small protein -
  FOC54_RS06200 (FOC54_06200) - 1219713..1221188 (-) 1476 WP_065581105.1 alkaline phosphatase -
  FOC54_RS11915 - 1221570..1221743 (+) 174 WP_002449232.1 hypothetical protein -
  FOC54_RS11920 - 1221911..1222078 (+) 168 WP_176700188.1 hypothetical protein -
  FOC54_RS06205 (FOC54_06205) braR 1222091..1222756 (+) 666 WP_002488207.1 response regulator transcription factor Regulator
  FOC54_RS06210 (FOC54_06210) braS 1222762..1223658 (+) 897 WP_065581106.1 sensor histidine kinase Regulator
  FOC54_RS06215 (FOC54_06215) - 1223790..1224539 (+) 750 WP_002449305.1 ABC transporter ATP-binding protein -
  FOC54_RS06220 (FOC54_06220) - 1224541..1226490 (+) 1950 WP_065581107.1 FtsX-like permease family protein -
  FOC54_RS06225 (FOC54_06225) - 1226578..1227342 (+) 765 WP_002449398.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25398.17 Da        Isoelectric Point: 4.6475

>NTDB_id=402474 FOC54_RS06205 WP_002488207.1 1222091..1222756(+) (braR) [Staphylococcus hominis strain FDAARGOS_746]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=402474 FOC54_RS06205 WP_002488207.1 1222091..1222756(+) (braR) [Staphylococcus hominis strain FDAARGOS_746]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGAAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGCTGTTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGGGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAGCTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769

Multiple sequence alignment