Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FOC55_RS01020 | Genome accession | NZ_CP046301 |
| Coordinates | 203989..204963 (+) | Length | 324 a.a. |
| NCBI ID | WP_002449861.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_747 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 198989..209963
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC55_RS00985 (FOC55_00985) | rpmG | 199451..199600 (+) | 150 | WP_155967669.1 | 50S ribosomal protein L33 | - |
| FOC55_RS00990 (FOC55_00990) | - | 199809..200360 (+) | 552 | WP_002449726.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| FOC55_RS00995 (FOC55_00995) | - | 200360..201817 (+) | 1458 | WP_002449916.1 | rhomboid family protein | - |
| FOC55_RS01000 (FOC55_01000) | - | 201801..202004 (+) | 204 | WP_037555982.1 | YqgQ family protein | - |
| FOC55_RS01005 (FOC55_01005) | - | 202001..202987 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| FOC55_RS01010 (FOC55_01010) | - | 202987..203310 (+) | 324 | WP_002449910.1 | MTH1187 family thiamine-binding protein | - |
| FOC55_RS01015 (FOC55_01015) | - | 203312..203938 (+) | 627 | WP_002449717.1 | MBL fold metallo-hydrolase | - |
| FOC55_RS01020 (FOC55_01020) | comGA | 203989..204963 (+) | 975 | WP_002449861.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FOC55_RS01025 (FOC55_01025) | comGB | 204935..205999 (+) | 1065 | WP_002455292.1 | competence type IV pilus assembly protein ComGB | - |
| FOC55_RS01030 (FOC55_01030) | comGC | 206018..206329 (+) | 312 | WP_002449700.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FOC55_RS01035 (FOC55_01035) | comGD | 206319..206753 (+) | 435 | WP_002449773.1 | competence type IV pilus minor pilin ComGD | - |
| FOC55_RS01040 (FOC55_01040) | - | 206945..207442 (+) | 498 | WP_002449908.1 | competence protein ComG | - |
| FOC55_RS01050 (FOC55_01050) | - | 207607..208116 (+) | 510 | WP_002449809.1 | shikimate kinase | - |
| FOC55_RS01055 (FOC55_01055) | gcvT | 208308..209399 (+) | 1092 | WP_002488553.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36955.92 Da Isoelectric Point: 8.2269
>NTDB_id=402434 FOC55_RS01020 WP_002449861.1 203989..204963(+) (comGA) [Staphylococcus hominis strain FDAARGOS_747]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=402434 FOC55_RS01020 WP_002449861.1 203989..204963(+) (comGA) [Staphylococcus hominis strain FDAARGOS_747]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTTTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTTTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.753 |
100 |
0.698 |
| comGA | Staphylococcus aureus N315 |
69.753 |
100 |
0.698 |