Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FOB21_RS06015 Genome accession   NZ_CP046296
Coordinates   1000023..1004474 (-) Length   1483 a.a.
NCBI ID   WP_004731992.1    Uniprot ID   -
Organism   Acinetobacter lwoffii strain FDAARGOS_552     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 995023..1009474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB21_RS05985 (FOB21_05985) elsL 995997..996530 (-) 534 WP_138743327.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  FOB21_RS05990 (FOB21_05990) - 996656..997009 (-) 354 Protein_965 YbaN family protein -
  FOB21_RS05995 (FOB21_05995) - 997097..997972 (+) 876 WP_004731985.1 DUF1853 family protein -
  FOB21_RS06000 (FOB21_06000) - 998085..998237 (+) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  FOB21_RS06005 (FOB21_06005) dapE 998359..999495 (+) 1137 WP_004731987.1 succinyl-diaminopimelate desuccinylase -
  FOB21_RS06010 (FOB21_06010) - 999561..1000019 (-) 459 WP_004731989.1 hypothetical protein -
  FOB21_RS06015 (FOB21_06015) chpA 1000023..1004474 (-) 4452 WP_004731992.1 Hpt domain-containing protein Regulator
  FOB21_RS06020 (FOB21_06020) - 1004642..1006714 (-) 2073 Protein_971 methyl-accepting chemotaxis protein -
  FOB21_RS06030 (FOB21_06030) - 1006761..1007297 (-) 537 WP_004280709.1 chemotaxis protein CheW -
  FOB21_RS06035 (FOB21_06035) - 1007303..1007671 (-) 369 WP_004731998.1 response regulator -
  FOB21_RS06040 (FOB21_06040) pilG 1007698..1008081 (-) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  FOB21_RS06045 (FOB21_06045) - 1008428..1008820 (-) 393 Protein_975 transposase family protein -
  FOB21_RS06050 (FOB21_06050) - 1008858..1009262 (-) 405 WP_000669095.1 transposase family protein -

Sequence

Protein


Download         Length: 1483 a.a.        Molecular weight: 165969.01 Da        Isoelectric Point: 4.3221

>NTDB_id=402397 FOB21_RS06015 WP_004731992.1 1000023..1004474(-) (chpA) [Acinetobacter lwoffii strain FDAARGOS_552]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
ADHLTAEGQMTGLELADNEPSEVELTIAPVEVPVRSDIEETVAIFIEEAEEHLDTIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIEQIFEASSKVEHLFKTLLQDEIASTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWHDYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKSAYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSNQNVELSSESTQVAET
VATGSVDFAGLSQRIAADRQQQQSTETNRDFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGG
ANMIAALHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNVSDRIQSIREDGIDYPAPEAIAILQNIQVLVSGQAV
AAAESANTVVEVAEVQATSISEPQLEESATTEHPATDLAEAEELLEILESPEATEDIPVERSEEDELKSIVEESFLEESE
EILANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWL
RQAIFQHDYNGFDQLYSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGTSDSNNEMIRIS
ADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYS
SLNQLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAEL
IVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEMGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREK
AMSLDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTIFTIRVPTTVAVS
DALMVKVGDQQYAISLAQIDRIVRIAPTILESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGN
SGQTIALLVDQLVGSRAQIVVKPIGQQFANVRVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNANAR
RLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMI
TSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4452 bp        

>NTDB_id=402397 FOB21_RS06015 WP_004731992.1 1000023..1004474(-) (chpA) [Acinetobacter lwoffii strain FDAARGOS_552]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCATACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCCTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGATC
TGCGTCCAATGGTGCTGTTGGGACAACAATTACAACAACAAATTTCGCCTGAACCTGCATTGGAAGAATTACTGGCATTG
GCAGATCATTTGACCGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGTTGAGCTAACAAT
AGCGCCAGTAGAAGTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
ATACGATTGCTACCTTCCTTCGCACTGAAGATGAAAAATCACAAGATTATAATGCGCTGATTCGTGCGATTCATACTTTG
CGCGGCAGTTCATCGATGGCGCAGATTGAGCAGATTTTTGAAGCCAGTTCCAAGGTGGAACATCTGTTCAAAACTTTGCT
ACAGGATGAAATTGCTTCTACTTCAAAAGAAACTGCTTTGCTGATTCAGTATGCGGAGTTCGTGAGTGACTATCTGCACC
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATACGCCACCTTTGAGCGTGTCTGGCATGATTATGGCTTTGCA
GTTACTGAAACCAATAGCATTCAGACGCAAGGCTTGGTGTCCAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TAGCACATACAGAAAGCCGGGCAGCGCAGGGAATTCATGAATTCACTGCCGATCTGAAATCGGCTTATGATGCGCTGCTT
GAAAAGCCAGTACTGCTAAATAGCGATTATGCCTATGAATTGTTCGCACAGGCGCACCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGTGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAATCAGAATGTTGAGCTAAGCTCAGAGAGCACACAGGTGGCTGAAACT
GTCGCGACTGGTAGTGTGGATTTTGCTGGCTTGAGCCAACGTATCGCTGCGGATCGTCAACAGCAGCAAAGTACTGAAAC
CAACCGTGATTTTGATGAAGAATTATTAAGTATCTTCCTGGAAGAAGCGGATGAATTGCTGGCAGGGATTGATGAAGATC
TGAATACCTGGAGTAAAAAACAGGACGATACAACCTCACTGAACAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGT
GCAAACATGATTGCAGCTTTGCATATCGGTTTGATTGCACATGAACTGGAAAGTATTTATGAGCGGGTGATCCGTCAGCA
AATTGCCGTGACACCTGCTTTAATCCAGATTATTCGTCTGGTTCAGGATAACGTTTCCGATCGTATTCAATCCATTCGAG
AAGACGGTATTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGTGCTGGTGTCTGGACAAGCTGTT
GCTGCTGCGGAGAGCGCGAATACTGTAGTTGAAGTTGCAGAGGTCCAAGCGACATCAATTTCTGAGCCGCAACTTGAAGA
GTCAGCAACGACTGAACATCCTGCAACTGATCTGGCAGAAGCTGAAGAATTACTGGAAATCTTGGAATCTCCTGAGGCTA
CTGAAGACATACCAGTAGAACGTTCTGAAGAAGACGAACTGAAATCGATTGTTGAAGAATCTTTCTTGGAAGAATCCGAA
GAGATTCTGGCGAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACA
GCGTGCTGCCCATAGTATCAAGGGTGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTGGAAA
CGACTTTCGAACAGTTTGCGGTCTACCAATTTAACTCGAATGCTTATGATGGCTTATTGCAGAAAACGCTGGTTTGGTTA
AGACAGGCGATTTTCCAGCATGACTATAACGGTTTTGATCAGCTGTACAGCAGTCTGAAAAAGATTGCTTATGTGGACGT
TACTGCGCAATTGCCTGAGCGTCTGGCGAAAACAGATAATCTGGTGGTCAGCACCGACTTCGGCTTTGTTGAAGGTGATG
GTACTGAACCGCCACAGATGATGGGTGAGTGGGCGAATAGCGGCACCAGCGATAGCAATAACGAGATGATCCGTATCTCT
GCTGATCTGGTCGAGAAGATGATTGACCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTAGGGCA
GCTTGGCAATACCTTGAACGAGATGGAATTGGCGATCAAGCGTCTTGCTGATCAGTTACGTCGAATGGAAGGCGAGCTGG
AATCACAGATTATTGCCAAACATGGTTCAGAGAACTCGCGCTATGCCGACTTTGACCCGCTGGAAATGGACCAATATTCC
TCTCTAAACCAGCTGTCCAAATCACTGGCAGAATCTGCATCAGATTTGGTCGACTTCAAGAGTACCTTAGCCGACAAGAT
TCGCGAAACCGAAGGACTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGG
TCCCATTTGACCGGATGTTGCCGCGTTTACAGCGTATTGTGCGTCAAACCTCGACCACCTTGAACCGTCCTGCAGAACTG
ATCGTACAGAATACCGAAGGTGAACTGGATCGTAACATTCTCGAGCGTCTGGTCACACCATTTGAGCATATGCTGCGTAA
CGCGATTGACCATGGTCTGGAAGATACTGCAGATCGTATCGCACTGAACAAGCCGGAAATGGGTTCGATTGTCTTGAACA
TCAGTCGTCAGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATCGATGCGGAGAAGATTCGTGAAAAA
GCGATGAGTCTGGATCTGATCAAAGCGGATCAAGTTATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCTGGTTT
CAGTACCGCGAAAGCAGTGACCCAGATTTCTGGTCGTGGTGTCGGTCTGGACGTGGTGCAAAGTGAAATCAAATCTCTTG
GCGGCCATGTGTCAGTAAGCTCGGAACTAGGCAAGGGCACCATCTTTACGATTCGCGTACCGACGACCGTGGCGGTCAGC
GATGCCTTGATGGTGAAAGTGGGCGATCAGCAATATGCGATTTCACTGGCGCAGATTGACCGAATTGTACGTATTGCGCC
GACTATATTGGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGCTGCGTTATCTGT
CTGAGTTTGTTGGCAACCAGCCAATTCCACGTCTGAATAATGTTGGGCATTCATTGCCGGTGCTGTTGATCAAAGGAAAT
AGTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGGTCGGTTCTCGAGCGCAGATTGTGGTGAAACCGATTGGACAGCA
GTTTGCCAATGTCAGAGTGGTGGCCGGTGCTACGATTTTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATG
TTGCCCGTCAGATTCAGGCGACACAGCGTGTCAAACAGCTCAATGATCAGCGTGATGGTTCGCGTAATGCAAATGCACGT
CGTCTGGTAATGATTGTCGATGACTCGGTAACTGTACGTAAAGTGACGTCGCGTCTGCTTGAACGTCAAGGCTATGATAT
TGTGACTGCCAAAGATGGTGTGGATGCGATCGAGCAGCTTGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAA
TGCCGCGCATGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATT
ACCTCACGTACCGGTGAGAAGCATCGTGAACGTGCATTCAGCTTGGGCGTAACGCACTATATGGGTAAACCGTTCCAGGA
AGCGGAGCTGCTGGCCAATATCCAGCAACTGATTGCTGAAAAACAGGGGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1060-1195)

Response regulator receiver domain (Response_reg)

(1363-1474)

CheW-like domain (CheW)

(1202-1337)

Hpt domain (Hpt)

(713-777)

Hpt domain (Hpt)

(201-276)

Hpt domain (Hpt)

(514-601)

Hpt domain (Hpt)

(25-107)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.284

100

0.624

Multiple sequence alignment