Detailed information NTG0402368

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HUZ63_RS00925
• Genome accession: NZ_CP054965
• Coordinates: 192931..193914 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain STIN_95
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 187931..198914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUZ63_RS00905 (HUZ63_00890)	dppA	189075..190682 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HUZ63_RS00910 (HUZ63_00895)	-	190744..190971 (-)	228	WP_000198576.1	hypothetical protein	-
HUZ63_RS00915 (HUZ63_00900)	dppB	190989..192008 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HUZ63_RS00920 (HUZ63_00905)	dppC	192018..192920 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HUZ63_RS00925 (HUZ63_00910)	amiE	192931..193914 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HUZ63_RS00930 (HUZ63_00915)	dppF	193911..194915 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HUZ63_RS00935 (HUZ63_00920)	yhjV	194945..196216 (-)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
HUZ63_RS00940 (HUZ63_00925)	ldrD	196692..196799 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUZ63_RS00945 (HUZ63_00930)	bcsG	196885..198564 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HUZ63_RS00950 (HUZ63_00935)	bcsF	198561..198752 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=402368 HUZ63_RS00925 WP_001196477.1 192931..193914(+) (amiE) [Escherichia coli strain STIN_95]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=402368 HUZ63_RS00925 WP_001196477.1 192931..193914(+) (amiE) [Escherichia coli strain STIN_95]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTTGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404