Detailed information NTG0402340

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS6192_RS18865
• Genome accession: NZ_CP054940
• Coordinates: 3877179..3878162 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain MS6192
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3872179..3883162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS6192_RS18840 (MS6192_03843)	-	3873328..3873435 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6192_RS18845 (MS6192_03845)	-	3873811..3873918 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6192_RS18850 (MS6192_03848)	-	3874294..3874401 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6192_RS18855 (MS6192_03850)	yhjV	3874877..3876148 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
MS6192_RS18860 (MS6192_03851)	dppF	3876178..3877182 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS6192_RS18865 (MS6192_03852)	amiE	3877179..3878162 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS6192_RS18870 (MS6192_03853)	dppC	3878173..3879075 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS6192_RS18875 (MS6192_03854)	dppB	3879085..3880104 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MS6192_RS18880 (MS6192_03855)	dppA	3880255..3881862 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=402340 MS6192_RS18865 WP_001196496.1 3877179..3878162(-) (amiE) [Escherichia coli strain MS6192]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=402340 MS6192_RS18865 WP_001196496.1 3877179..3878162(-) (amiE) [Escherichia coli strain MS6192]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401