Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HUT14_RS25685 Genome accession   NZ_CP054939
Coordinates   5683418..5684197 (-) Length   259 a.a.
NCBI ID   WP_004924614.1    Uniprot ID   D9XTE6
Organism   Streptomyces sp. NA02536     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5678418..5689197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT14_RS25675 (HUT14_25685) - 5680077..5680796 (+) 720 WP_176119640.1 GNAT family N-acetyltransferase -
  HUT14_RS25680 (HUT14_25690) - 5680861..5682837 (+) 1977 WP_176118516.1 ATP-dependent DNA helicase -
  HUT14_RS25685 (HUT14_25695) dinR/lexA 5683418..5684197 (-) 780 WP_004924614.1 transcriptional repressor LexA Regulator
  HUT14_RS25690 (HUT14_25700) nrdR 5684728..5685294 (+) 567 WP_176118518.1 transcriptional regulator NrdR -
  HUT14_RS25695 (HUT14_25705) - 5685460..5688354 (+) 2895 WP_004924609.1 vitamin B12-dependent ribonucleotide reductase -
  HUT14_RS25700 (HUT14_25710) - 5688468..5689001 (-) 534 WP_121548151.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27997.70 Da        Isoelectric Point: 7.1329

>NTDB_id=402275 HUT14_RS25685 WP_004924614.1 5683418..5684197(-) (dinR/lexA) [Streptomyces sp. NA02536]
MTTTADSAAITAQDRHQGRLEPAHAMNEATNPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=402275 HUT14_RS25685 WP_004924614.1 5683418..5684197(-) (dinR/lexA) [Streptomyces sp. NA02536]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGGATCGCCACCAGGGCCGACTCGAGCCGGCGCATGCGATGAA
CGAAGCCACGAATCCCGAGGGGCACAAGCGCTCCCTGCCGGGCCGACCTCCCGGCATCCGGGCGGACAGCTCCGGACTCA
CCGACCGCCAGCGCCGGGTGATCGAGGTCATCAGGGACTCGGTCCAGCGGCGCGGCTACCCGCCGTCGATGCGTGAGATC
GGCCAGGCGGTCGGCCTCTCCAGCACCTCCTCGGTGGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGGGCGTACGAGGTGCGCGGCTCCGACCAGGCCGCCTCCGTGCAGCCCACGGACACCGCCGGCA
AGCCGGCCGCGTCCTACGTGCCGCTGGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTCCCCCGGCAGCTCGTCGGTGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCCATGATCGAGGC
GGCGATCTGTGACGGCGACTGGGTCACGGTCCGCCGTCAGCCGGTCGCCGAGAACGGCGACATCGTGGCGGCGATGCTCG
ACGGCGAGGCGACGGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTGCTCCCGCACAACGCGGCCTACGAGCCG
ATCCCGGGCGACGACGCGACCATTCTGGGCAAGGTGGTGGCCGTTCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D9XTE6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375