Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   HUT14_RS24320 Genome accession   NZ_CP054939
Coordinates   5372937..5373938 (+) Length   333 a.a.
NCBI ID   WP_004925168.1    Uniprot ID   D9XZZ0
Organism   Streptomyces sp. NA02536     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 5367937..5378938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT14_RS24300 (HUT14_24310) - 5367985..5368773 (+) 789 WP_228313071.1 enhanced serine sensitivity protein SseB C-terminal domain-containing protein -
  HUT14_RS24305 (HUT14_24315) - 5369184..5370857 (+) 1674 WP_121547629.1 ABC transporter substrate-binding protein -
  HUT14_RS24310 (HUT14_24320) - 5370965..5371969 (+) 1005 WP_176118351.1 ABC transporter permease -
  HUT14_RS24315 (HUT14_24325) - 5371971..5372930 (+) 960 WP_004925170.1 ABC transporter permease -
  HUT14_RS24320 (HUT14_24330) amiE 5372937..5373938 (+) 1002 WP_004925168.1 ABC transporter ATP-binding protein Regulator
  HUT14_RS24325 (HUT14_24335) - 5373935..5375272 (+) 1338 WP_176118353.1 oligopeptide/dipeptide ABC transporter ATP-binding protein -
  HUT14_RS24330 (HUT14_24340) - 5375401..5376057 (+) 657 WP_121547631.1 trimeric intracellular cation channel family protein -
  HUT14_RS24335 (HUT14_24345) - 5376117..5376986 (+) 870 WP_176118354.1 thioesterase family protein -
  HUT14_RS24340 (HUT14_24350) - 5377077..5377727 (-) 651 WP_004925156.1 TetR family transcriptional regulator -
  HUT14_RS24345 (HUT14_24355) - 5377841..5378008 (+) 168 WP_040906084.1 hypothetical protein -
  HUT14_RS24350 (HUT14_24360) - 5378071..5378337 (+) 267 WP_040906083.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 35687.00 Da        Isoelectric Point: 5.8760

>NTDB_id=402269 HUT14_RS24320 WP_004925168.1 5372937..5373938(+) (amiE) [Streptomyces sp. NA02536]
MSLLTVDELTITFGGRGRKESRAVDGVSFEVDQGQVVGLVGESGCGKSVTSLALMGLLPSKGVTIGGRAEFDGTDLFTMN
ASARRDLRGSEMAMIFQDPLSSLNPVVPIGVQVIEILERHRGLKGEAARKEAAHLLDRVGIPDPTRRLKEYPHQLSGGMR
QRALIAMAVACAPRMLIADEPTTALDVTIQAQILELLKELVDQEGTALLMITHDLGVVAGLCDQVNVLYAGKTVESAGRR
ELFGHPTHPYAHGLLGSIPRLDAPRGEPLTPIRGSINDRIAWADGCAFAPRCDRYEMGCLTGTPQLTEPRAAGHQVRCVN
PVLDDAKAEEVTA

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=402269 HUT14_RS24320 WP_004925168.1 5372937..5373938(+) (amiE) [Streptomyces sp. NA02536]
ATGTCTCTGCTCACTGTCGACGAACTGACCATCACCTTCGGCGGCCGCGGCCGCAAGGAGTCCCGGGCGGTCGACGGCGT
CTCCTTCGAGGTCGACCAGGGCCAGGTCGTGGGCCTGGTCGGCGAGTCCGGCTGCGGAAAGTCCGTCACCTCCCTGGCCC
TGATGGGCCTGCTCCCGAGCAAGGGCGTCACCATCGGCGGCCGTGCCGAGTTCGACGGCACGGACCTGTTCACGATGAAC
GCCTCCGCCCGCCGCGACCTGCGCGGCAGCGAGATGGCGATGATCTTCCAGGACCCGCTGTCCTCCCTCAACCCGGTCGT
GCCGATCGGCGTGCAGGTCATCGAGATCCTGGAGCGCCACCGCGGACTGAAGGGCGAGGCCGCCCGCAAGGAGGCCGCCC
ACCTGCTGGACCGGGTCGGCATCCCCGACCCGACCCGGCGGCTCAAGGAGTACCCGCACCAGCTCTCCGGCGGTATGCGC
CAGCGCGCGCTGATCGCCATGGCGGTGGCCTGCGCCCCGCGCATGCTCATCGCCGACGAGCCGACCACGGCCCTGGACGT
GACCATCCAGGCCCAGATCCTTGAACTGCTCAAGGAGCTCGTGGACCAGGAGGGCACCGCCCTGCTGATGATCACCCACG
ACCTTGGCGTGGTCGCCGGCCTCTGCGACCAGGTCAACGTGCTCTACGCGGGCAAGACCGTGGAGTCCGCCGGGCGCCGC
GAGCTGTTCGGGCACCCGACCCACCCCTACGCGCACGGACTGCTGGGCTCCATCCCGCGTCTGGACGCTCCCCGGGGCGA
ACCCCTCACCCCCATCCGGGGCTCCATCAACGACCGCATCGCCTGGGCCGACGGCTGCGCCTTCGCGCCCCGCTGCGACC
GGTACGAGATGGGCTGCCTGACCGGCACCCCGCAGCTCACCGAGCCGCGTGCGGCCGGCCACCAGGTGCGGTGCGTCAAC
CCCGTACTCGACGACGCGAAGGCCGAGGAGGTCACCGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB D9XZZ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

45.27

88.889

0.402

  amiE Streptococcus thermophilus LMG 18311

45.548

87.688

0.399

  amiE Streptococcus thermophilus LMD-9

45.548

87.688

0.399

  oppD Streptococcus mutans UA159

45.704

87.387

0.399


Multiple sequence alignment