Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HUT14_RS11010 Genome accession   NZ_CP054939
Coordinates   2458027..2459760 (+) Length   577 a.a.
NCBI ID   WP_121545896.1    Uniprot ID   A0A494URE1
Organism   Streptomyces sp. NA02536     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2453027..2464760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT14_RS10965 (HUT14_10970) - 2453052..2454008 (-) 957 WP_121545892.1 sensor histidine kinase -
  HUT14_RS10970 (HUT14_10975) - 2454005..2454307 (-) 303 WP_254895970.1 STAS domain-containing protein -
  HUT14_RS10975 (HUT14_10980) - 2454612..2455238 (+) 627 WP_254895768.1 ANTAR domain-containing protein -
  HUT14_RS10980 (HUT14_10985) - 2455320..2455484 (+) 165 WP_163013239.1 hypothetical protein -
  HUT14_RS11000 (HUT14_11005) - 2456100..2456405 (+) 306 WP_121545895.1 YtxH domain-containing protein -
  HUT14_RS11005 (HUT14_11010) - 2456466..2457920 (+) 1455 WP_004931600.1 FGGY family carbohydrate kinase -
  HUT14_RS11010 (HUT14_11015) rcrP 2458027..2459760 (+) 1734 WP_121545896.1 ABC transporter ATP-binding protein Regulator
  HUT14_RS11015 (HUT14_11020) rcrQ 2459760..2461688 (+) 1929 WP_176117166.1 ABC transporter ATP-binding protein Regulator
  HUT14_RS11020 (HUT14_11025) - 2461777..2462991 (-) 1215 WP_142170964.1 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62607.68 Da        Isoelectric Point: 5.9726

>NTDB_id=402232 HUT14_RS11010 WP_121545896.1 2458027..2459760(+) (rcrP) [Streptomyces sp. NA02536]
MLIRLLRTHLEPYKRPIALLVLLQFLQTSATLYLPTLNADIIDRGVVQGDTGYILSYGALMIGISLAQVVCNIGAVYYGA
RTASALGRDVRAAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIVMALGLDVPLSGV
LVAVVPVLAVCVTLIVRRLRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDTYEQGRFRKSNTELTDMSLRTGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTSSSVVP
PAAPVTELRRHGHLEVRGAGFRYPGAEEPVLKGVDLVARPGEVTAVIGSTGSGKSTLLGLVPRLFDATDGEVLVDGVPVA
EVEPALLARTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWQALEVAQGRDFVERLDGGLDAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAEATVVIVAQRVATIRDADRIVVLDEGRVVGTGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=402232 HUT14_RS11010 WP_121545896.1 2458027..2459760(+) (rcrP) [Streptomyces sp. NA02536]
GTGCTCATACGACTCCTGCGGACCCATCTCGAGCCCTACAAGAGACCCATCGCCCTGCTGGTGCTGCTGCAGTTCCTGCA
GACCAGCGCCACGCTCTACCTGCCCACGCTCAACGCGGACATCATCGACCGGGGGGTCGTCCAGGGCGACACCGGTTACA
TCCTGAGCTATGGCGCCCTGATGATCGGCATCTCGCTGGCGCAGGTCGTCTGCAACATCGGCGCCGTGTACTACGGCGCC
CGGACCGCGTCGGCCCTCGGACGGGACGTGCGCGCCGCCGTGTTCGACCGGGTGCAGTCGTTCTCCGCGCGTGAGGTCGG
TCACTTCGGCGCGCCCTCGCTGATCACCCGTACGACGAACGACGTCCAGCAGGTGCAGATGCTGGTCCTGATGACGTTCA
CCCTGATGGTGTCGGCGCCGATCATGTGTGTGGGCGGCATCGTGATGGCGCTCGGCCTGGACGTCCCGCTGTCGGGCGTG
CTGGTCGCGGTGGTGCCGGTGCTGGCCGTCTGCGTGACGCTGATCGTGCGGCGGCTGCGGCCGCTGTTCCGGACCATGCA
GGAGCGGCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGTAACAGGGTGATCCGCGCGTTCGTCCGGGACA
CCTACGAACAGGGGCGGTTCCGGAAGTCCAACACCGAGCTGACCGACATGTCGCTGCGCACGGGCAATCTGCTCGCGCTG
ATGTTCCCGGTGGTCATGACGGTGGTGAACCTGTCGTCCATCGCGGTGGTGTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTGCTGGGCACCTCCTCCAGCGTGGTGCCC
CCGGCCGCGCCGGTCACCGAGCTGCGCCGGCACGGTCATCTGGAGGTCCGGGGCGCGGGGTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGAAGGGGGTCGACCTGGTGGCGCGGCCCGGTGAGGTCACCGCCGTGATCGGTTCGACCGGCAGCGGCA
AGTCGACGCTGCTCGGCCTGGTCCCCCGGCTGTTCGACGCGACCGACGGGGAGGTGCTGGTGGACGGCGTACCCGTGGCG
GAGGTCGAACCGGCGCTGCTGGCCAGGACGGTCGGGCTGGTGCCGCAGAAGCCGTACCTGTTCGCGGGGACGGTGGCGAC
CAATCTGCGCTACGGCAATCCGGACGCCACGGACGAGGAACTGTGGCAGGCGCTGGAGGTGGCGCAGGGCAGGGACTTCG
TGGAGCGGCTGGACGGCGGCCTCGACGCGCCGATCTCCCAGGGCGGCACGAACGTCTCCGGCGGTCAGCGCCAGCGCCTG
GCAATCGCCCGGACGCTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCCACCGA
CGCGGCCCTGCGGGCGGCGCTCGCGCGGGAGACGGCCGAGGCGACCGTGGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCGTGGTCCTCGACGAGGGCCGCGTCGTCGGCACCGGCCGGCACCACGAGCTGATGGCGGACAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A494URE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

37.716

100

0.378