Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HUT18_RS20075 Genome accession   NZ_CP054918
Coordinates   4699002..4700126 (-) Length   374 a.a.
NCBI ID   WP_176101983.1    Uniprot ID   -
Organism   Streptomyces sp. NA04227     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4694002..4705126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT18_RS20050 (HUT18_20045) - 4694595..4695011 (+) 417 WP_176101978.1 hypothetical protein -
  HUT18_RS20055 (HUT18_20050) - 4695008..4696981 (+) 1974 WP_176101979.1 caspase family protein -
  HUT18_RS20060 (HUT18_20055) - 4697013..4697168 (-) 156 WP_176101980.1 hypothetical protein -
  HUT18_RS20065 (HUT18_20060) - 4697520..4698563 (+) 1044 WP_176101981.1 aldo/keto reductase -
  HUT18_RS20070 (HUT18_20065) - 4698603..4698863 (-) 261 WP_176101982.1 hypothetical protein -
  HUT18_RS20075 (HUT18_20070) disA 4699002..4700126 (-) 1125 WP_176101983.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HUT18_RS20080 (HUT18_20075) radA/sms 4700194..4701603 (-) 1410 WP_176101984.1 DNA repair protein RadA Machinery gene
  HUT18_RS20085 (HUT18_20080) - 4701916..4703889 (+) 1974 WP_254878718.1 hypothetical protein -
  HUT18_RS20090 (HUT18_20085) - 4703929..4704726 (-) 798 WP_254879056.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40295.09 Da        Isoelectric Point: 4.9269

>NTDB_id=402099 HUT18_RS20075 WP_176101983.1 4699002..4700126(-) (disA) [Streptomyces sp. NA04227]
MAANDRAATPGKSGGISAADGLMRASLSAVAPGTGLRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTARRSRTVDEALSELDSLSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=402099 HUT18_RS20075 WP_176101983.1 4699002..4700126(-) (disA) [Streptomyces sp. NA04227]
GTGGCAGCCAACGACCGGGCAGCGACTCCCGGCAAATCCGGCGGGATCTCCGCCGCCGATGGGCTGATGCGTGCCTCGCT
GAGCGCCGTCGCACCGGGCACCGGGCTGCGTGACGGCCTGGAGCGGATCCTCCGGGGCAACACCGGAGGCCTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCCATGTGCACCGGCGGTTTCGTCCTCGATGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACATCACCAAGATCCTTCGGGCCGGTGTGCAACTGGTACC
CGACCCGACCATCCCGACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGTGTCTCCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTGTCCCGGGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTGCGCCTCGACGAGGTCGCGGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCACCGCCGTCTCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACCGACGGCCGTCTGCTCGCCCTCCAGCTGGAGGAGCTGATCGCG
GGCGTCGAACCGGACCGCGAACTCGTCGTACGCGACTACGTCCCCGAGCCCACCGCCCGCCGTTCCCGTACGGTCGACGA
GGCCCTGTCCGAGCTGGACTCGCTGAGCCACGCCGAGCTGCTCGAACTGCCCACGGTCGCCCGCGCGTTGGGCTACACGG
GCTCCCCCGAAGCCCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGCCTCTTGGCGAAGGTCCCGCGCCTGCCCGGCGCC
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGTGTGCGTGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.243

92.513

0.428