Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   HUT19_RS14170 Genome accession   NZ_CP054916
Coordinates   3349440..3350489 (-) Length   349 a.a.
NCBI ID   WP_254886163.1    Uniprot ID   -
Organism   Streptomyces sp. NA02950     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 3344440..3355489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT19_RS14150 (HUT19_14150) - 3344491..3345519 (-) 1029 WP_254885567.1 ABC transporter permease -
  HUT19_RS14155 (HUT19_14155) - 3345512..3346435 (-) 924 WP_176180829.1 ABC transporter permease -
  HUT19_RS14160 (HUT19_14160) - 3346438..3348087 (-) 1650 WP_176180830.1 ABC transporter substrate-binding protein -
  HUT19_RS14165 (HUT19_14165) - 3348284..3349447 (-) 1164 WP_176180831.1 ABC transporter ATP-binding protein -
  HUT19_RS14170 (HUT19_14170) amiE 3349440..3350489 (-) 1050 WP_254886163.1 ABC transporter ATP-binding protein Regulator
  HUT19_RS14175 (HUT19_14175) - 3350510..3351475 (-) 966 WP_176180833.1 ABC transporter permease -
  HUT19_RS14180 (HUT19_14180) - 3351468..3352394 (-) 927 WP_176186860.1 ABC transporter permease -
  HUT19_RS14185 (HUT19_14185) - 3352547..3354193 (-) 1647 WP_176180834.1 ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 349 a.a.        Molecular weight: 38133.08 Da        Isoelectric Point: 6.8281

>NTDB_id=402017 HUT19_RS14170 WP_254886163.1 3349440..3350489(-) (amiE) [Streptomyces sp. NA02950]
MEKTTSATARVGEGDDGTPLLEVRDLHVEFHTREGLAKAVNGVNYSVRAGETLAVLGESGSGKSVTAQAIMGILDMPPGK
IPQGQILYRGEDMLTMSGEERRKIRGRKIAMIFQDALSALNPVLSVGYQLGEMFRVHQGLSKKEAKAKAIELMDRVRIPA
AKERVGDYPHQFSGGMRQRIMIAMALALEPDLIIADEPTTALDVTVQAQVMDLLAELQREYNMGLILITHDLGVVADVAD
KIAVMYAGRIVETAPVHELYKRPAHPYTRGLLDSIPRLDRKGQELYAIKGLPPNLLKIPSGCAFNPRCPKAQDICTTEVP
ALHPVTEQDGTELPGRGSACHFWKETIHG

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=402017 HUT19_RS14170 WP_254886163.1 3349440..3350489(-) (amiE) [Streptomyces sp. NA02950]
ATCGAGAAGACCACGAGCGCCACCGCCCGCGTGGGCGAGGGCGACGACGGCACCCCGCTGCTGGAAGTCCGCGACCTGCA
CGTGGAGTTCCACACCCGGGAGGGCCTGGCCAAGGCCGTCAACGGCGTCAACTACAGCGTCCGCGCCGGTGAGACGCTCG
CCGTGCTCGGCGAGTCGGGCTCCGGCAAGTCGGTGACCGCCCAGGCCATCATGGGCATCCTCGACATGCCGCCCGGGAAG
ATCCCGCAGGGCCAGATCCTGTACCGCGGCGAGGACATGCTCACCATGTCGGGCGAGGAGCGCCGGAAGATCCGCGGCCG
GAAGATCGCCATGATCTTCCAGGACGCGCTCTCGGCCCTCAACCCGGTGCTCTCCGTGGGCTACCAGCTGGGCGAGATGT
TCCGCGTCCACCAGGGGCTGTCCAAGAAGGAGGCCAAGGCCAAGGCCATCGAGCTGATGGACCGGGTCCGCATCCCGGCG
GCCAAGGAGCGGGTGGGCGACTATCCGCACCAGTTCTCCGGCGGTATGCGCCAGCGCATCATGATCGCCATGGCGCTGGC
CCTGGAGCCGGACCTGATCATCGCCGACGAGCCCACCACCGCCCTGGACGTCACCGTCCAGGCCCAGGTGATGGATCTGC
TCGCCGAGCTCCAGCGCGAGTACAACATGGGCCTGATCCTCATCACCCACGACCTCGGGGTGGTGGCGGACGTCGCCGAC
AAGATCGCGGTGATGTACGCGGGCCGGATCGTGGAGACCGCGCCGGTGCACGAGCTCTACAAGCGCCCGGCCCACCCCTA
CACCCGGGGTCTGCTGGACTCCATCCCGCGGCTGGACCGCAAGGGCCAGGAGCTCTACGCGATCAAGGGCCTGCCGCCCA
ATCTGCTCAAGATCCCCTCGGGCTGTGCCTTCAACCCGCGCTGCCCCAAGGCGCAGGACATCTGCACCACCGAGGTCCCG
GCGCTGCACCCGGTCACCGAGCAGGACGGCACGGAACTGCCGGGGCGCGGCAGCGCGTGCCACTTCTGGAAGGAGACCAT
CCATGGCTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(251-315)

ABC transporter (ABC_tran)

(41-199)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

50.676

84.814

0.43
  amiE Streptococcus thermophilus LMG 18311

50.338

84.814

0.427
  amiE Streptococcus thermophilus LMD-9

50.338

84.814

0.427
  oppD Streptococcus mutans UA159

48.052

88.252

0.424