Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   HUT19_RS14145 Genome accession   NZ_CP054916
Coordinates   3343412..3344422 (-) Length   336 a.a.
NCBI ID   WP_176180828.1    Uniprot ID   -
Organism   Streptomyces sp. NA02950     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 3338412..3349422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT19_RS14115 (HUT19_14115) - 3338808..3339215 (-) 408 WP_176180822.1 ATP-binding protein -
  HUT19_RS14120 (HUT19_14120) - 3339477..3340739 (+) 1263 WP_176180823.1 helix-turn-helix domain-containing protein -
  HUT19_RS14125 (HUT19_14125) cutA 3340749..3341069 (-) 321 WP_176180824.1 divalent-cation tolerance protein CutA -
  HUT19_RS14130 (HUT19_14130) - 3341139..3341480 (-) 342 Protein_2853 NUDIX hydrolase -
  HUT19_RS14135 (HUT19_14135) - 3341903..3342358 (+) 456 WP_176180826.1 hypothetical protein -
  HUT19_RS14140 (HUT19_14140) - 3342355..3343419 (-) 1065 WP_176180827.1 ABC transporter ATP-binding protein -
  HUT19_RS14145 (HUT19_14145) amiE 3343412..3344422 (-) 1011 WP_176180828.1 ABC transporter ATP-binding protein Regulator
  HUT19_RS14150 (HUT19_14150) - 3344491..3345519 (-) 1029 WP_254885567.1 ABC transporter permease -
  HUT19_RS14155 (HUT19_14155) - 3345512..3346435 (-) 924 WP_176180829.1 ABC transporter permease -
  HUT19_RS14160 (HUT19_14160) - 3346438..3348087 (-) 1650 WP_176180830.1 ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 36678.36 Da        Isoelectric Point: 6.6092

>NTDB_id=402016 HUT19_RS14145 WP_176180828.1 3343412..3344422(-) (amiE) [Streptomyces sp. NA02950]
MTRLLDVRDLRVEIRTRDGVAEAVAGVSYGVDAGRTLAVLGESGSGKSVTAQAVMGILDTPPAFVTGGQVFFRGRDLLTM
GPRERRSVRGAAMAMIFQDALSALNPVLTVGAQLAEMYEVHRGMSRKDARARAVELMDRVRIPAATARVNDYPHQFSGGM
RQRIMIAMAIALEPELIIADEPTTALDVTVQAQVMDLLDELRREYAMGLILITHDLGVVADVADSIAVMYAGRIVETAPV
RELYRRPAHPYTRGLLDSIPRVDHKGKELYAIKGLPPSLLTVPTGCPFHPRCPRAQELCRTERPPLYEVPDALDATDAVA
PGRASACHFWKDELDA

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=402016 HUT19_RS14145 WP_176180828.1 3343412..3344422(-) (amiE) [Streptomyces sp. NA02950]
GTGACCCGCTTGCTGGACGTACGCGACCTCCGGGTCGAAATCCGCACCCGGGACGGCGTCGCCGAGGCCGTCGCCGGGGT
CAGCTACGGCGTGGACGCCGGCCGGACACTGGCCGTCCTGGGCGAGTCCGGCTCCGGCAAGTCGGTGACCGCCCAGGCCG
TCATGGGCATTCTCGACACCCCGCCCGCCTTCGTCACCGGCGGCCAGGTGTTCTTCCGGGGGCGTGACCTGCTGACGATG
GGCCCGCGGGAACGGCGCTCGGTGCGCGGCGCCGCGATGGCGATGATCTTCCAGGACGCGCTGTCGGCCCTCAACCCCGT
TCTGACAGTGGGCGCCCAGCTCGCCGAGATGTACGAGGTGCACCGCGGGATGTCCCGCAAGGACGCCCGGGCGCGGGCGG
TCGAGCTGATGGACCGGGTCCGCATCCCCGCGGCGACGGCGCGGGTGAACGACTATCCGCACCAGTTCTCCGGCGGGATG
CGCCAGCGGATCATGATCGCCATGGCGATCGCCCTGGAGCCGGAGCTGATCATCGCCGACGAACCCACCACCGCCCTCGA
CGTCACCGTCCAGGCCCAGGTGATGGATCTGCTCGACGAGTTGCGCCGGGAGTACGCCATGGGTCTGATCCTCATCACCC
ATGACCTCGGGGTGGTCGCGGACGTCGCGGACAGCATCGCCGTGATGTACGCCGGGCGGATCGTGGAGACCGCGCCGGTG
CGCGAGCTGTACCGGCGCCCGGCCCATCCGTACACCCGCGGACTGCTGGACTCCATTCCCCGGGTGGACCACAAGGGCAA
GGAGCTGTACGCCATCAAGGGCCTGCCGCCCAGTCTGCTCACCGTCCCCACCGGCTGCCCCTTCCACCCGCGCTGCCCAC
GTGCCCAGGAGCTCTGCCGCACCGAACGCCCGCCGCTGTACGAGGTGCCGGACGCGCTGGACGCCACGGACGCAGTCGCG
CCCGGACGGGCCAGCGCCTGCCACTTCTGGAAGGACGAACTCGATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

46.926

91.964

0.432

  amiE Streptococcus thermophilus LMG 18311

46.602

91.964

0.429

  amiE Streptococcus thermophilus LMD-9

46.602

91.964

0.429

  oppD Streptococcus mutans UA159

43.789

95.833

0.42