Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HUT19_RS10825 Genome accession   NZ_CP054916
Coordinates   2588581..2589381 (+) Length   266 a.a.
NCBI ID   WP_176180264.1    Uniprot ID   -
Organism   Streptomyces sp. NA02950     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2583581..2594381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT19_RS10815 (HUT19_10815) - 2584648..2587512 (-) 2865 WP_176180262.1 vitamin B12-dependent ribonucleotide reductase -
  HUT19_RS10820 (HUT19_10820) nrdR 2587628..2588149 (-) 522 WP_176180263.1 transcriptional regulator NrdR -
  HUT19_RS10825 (HUT19_10825) dinR/lexA 2588581..2589381 (+) 801 WP_176180264.1 transcriptional repressor LexA Regulator
  HUT19_RS10830 (HUT19_10830) - 2589470..2591470 (-) 2001 WP_176180265.1 ATP-dependent DNA helicase -
  HUT19_RS10835 (HUT19_10835) - 2591694..2592395 (-) 702 WP_176180266.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 28936.69 Da        Isoelectric Point: 7.4756

>NTDB_id=402000 HUT19_RS10825 WP_176180264.1 2588581..2589381(+) (dinR/lexA) [Streptomyces sp. NA02950]
MTTTAESTTITAQERSQSRLEQTHAINQTHTMNDATNPEGQKPSRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRG
YPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTTGKPAASYVPLVGRIAAGGPIL
AEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLP
HNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 801 bp        

>NTDB_id=402000 HUT19_RS10825 WP_176180264.1 2588581..2589381(+) (dinR/lexA) [Streptomyces sp. NA02950]
GTGACCACCACCGCAGAGAGCACCACTATCACCGCTCAGGAGCGCTCCCAGAGCAGGCTCGAACAGACGCACGCGATCAA
CCAGACCCACACCATGAACGACGCCACGAACCCGGAGGGCCAGAAGCCCTCGCGCGCCCTACCCGGACGACCTCCAGGCA
TCCGGGCGGACAGTTCGGGGCTGACCGACCGGCAGCGCCGTGTCATCGAGGTCATTCGCGACTCTGTGCAGCGGCGCGGC
TACCCGCCGTCCATGCGGGAGATCGGCCAGGCGGTAGGGCTCTCCAGCACCTCGTCCGTGGCCCATCAGCTGATGGCTCT
GGAGCGCAAGGGCTTTCTGCGGCGGGACCCCCACCGGCCCCGTGCCTACGAGGTCCGTGGCTCCGACCAGCCCAGCGCAC
AGCCGACGGACACCACCGGCAAGCCTGCCGCCTCCTATGTGCCGCTGGTCGGCCGGATCGCGGCCGGTGGCCCGATCCTC
GCCGAGGAGTCGGTGGAGGACGTCTTCCCGCTGCCCCGGCAGCTGGTCGGCGACGGTGAGCTGTTCGTGCTCAAAGTCGT
CGGCGACTCCATGATCGAGGCTGCCATCTGCGACGGCGACTGGGTGACGGTGCGCCGTCAGCCGGTCGCGGAGAACGGGG
ACATCGTCGCCGCGATGCTCGACGGCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTCCTCCCG
CACAACGCCGCGTACCAGCCGATCCCGGGCGATGAAGCGACCATCCTGGGCAAGGTGGTCGCGGTACTGCGGCGCGTCTG
A

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(148-260)

LexA DNA binding domain (LexA_DNA_bind)

(59-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.699

0.368