Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GK107_RS11845 | Genome accession | NZ_CP046250 |
| Coordinates | 2326010..2327083 (-) | Length | 357 a.a. |
| NCBI ID | WP_021322348.1 | Uniprot ID | - |
| Organism | Geobacillus thermoleovorans strain V0 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2321010..2332083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GK107_RS11805 (GK107_11615) | - | 2321738..2322532 (+) | 795 | WP_318538303.1 | YqhG family protein | - |
| GK107_RS11810 (GK107_11620) | - | 2322635..2322814 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| GK107_RS11815 (GK107_11625) | comGG | 2322860..2323249 (-) | 390 | WP_131872367.1 | competence type IV pilus minor pilin ComGG | - |
| GK107_RS11820 (GK107_11630) | comGF | 2323324..2323770 (-) | 447 | WP_318538304.1 | competence type IV pilus minor pilin ComGF | - |
| GK107_RS11825 (GK107_11635) | - | 2323749..2324075 (-) | 327 | WP_131872371.1 | type II secretion system protein | - |
| GK107_RS11830 (GK107_11640) | comGD | 2324059..2324496 (-) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| GK107_RS11835 (GK107_11645) | comGC | 2324486..2324782 (-) | 297 | WP_318538305.1 | competence type IV pilus major pilin ComGC | - |
| GK107_RS11840 (GK107_11650) | comGB | 2324985..2326013 (-) | 1029 | WP_047758066.1 | competence type IV pilus assembly protein ComGB | - |
| GK107_RS11845 (GK107_11655) | comGA | 2326010..2327083 (-) | 1074 | WP_021322348.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GK107_RS11850 (GK107_11660) | - | 2327276..2327974 (+) | 699 | WP_011231918.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GK107_RS11855 (GK107_11665) | - | 2328133..2328375 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| GK107_RS11860 (GK107_11670) | - | 2328459..2329592 (-) | 1134 | WP_318538306.1 | class I SAM-dependent methyltransferase | - |
| GK107_RS11865 (GK107_11675) | - | 2329913..2330545 (-) | 633 | WP_011231920.1 | MBL fold metallo-hydrolase | - |
| GK107_RS11870 (GK107_11680) | - | 2330715..2330891 (+) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39535.99 Da Isoelectric Point: 8.7901
>NTDB_id=401961 GK107_RS11845 WP_021322348.1 2326010..2327083(-) (comGA) [Geobacillus thermoleovorans strain V0]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=401961 GK107_RS11845 WP_021322348.1 2326010..2327083(-) (comGA) [Geobacillus thermoleovorans strain V0]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
96.359 |
0.487 |