Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   HUW54_RS03385 Genome accession   NZ_CP054876
Coordinates   705031..705705 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain Dresden-275757     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 700031..710705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW54_RS03360 (HUW54_03360) - 700246..701313 (+) 1068 WP_000980137.1 membrane protein -
  HUW54_RS03365 (HUW54_03365) - 701464..702507 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  HUW54_RS03370 (HUW54_03370) - 702836..703264 (+) 429 WP_000198504.1 hypothetical protein -
  HUW54_RS03375 (HUW54_03375) - 703473..703979 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  HUW54_RS03380 (HUW54_03380) graX 704092..705015 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  HUW54_RS03385 (HUW54_03385) braR 705031..705705 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  HUW54_RS03390 (HUW54_03390) graS 705698..706738 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  HUW54_RS03395 (HUW54_03395) vraF 706882..707643 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  HUW54_RS03400 (HUW54_03400) vraG 707633..709522 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=401910 HUW54_RS03385 WP_001166505.1 705031..705705(+) (braR) [Staphylococcus aureus strain Dresden-275757]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=401910 HUW54_RS03385 WP_001166505.1 705031..705705(+) (braR) [Staphylococcus aureus strain Dresden-275757]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402