Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SOR_RS01845 Genome accession   NC_015291
Coordinates   369554..370285 (+) Length   243 a.a.
NCBI ID   WP_000889946.1    Uniprot ID   -
Organism   Streptococcus oralis Uo5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 364554..375285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS01825 (SOR_0371) dnaJ 366850..367986 (+) 1137 WP_001066315.1 molecular chaperone DnaJ -
  SOR_RS01830 (SOR_0372) - 368065..368718 (-) 654 WP_000808554.1 hypothetical protein -
  SOR_RS01835 (SOR_0373) - 368788..369066 (-) 279 WP_000777740.1 hypothetical protein -
  SOR_RS01840 (SOR_0374) - 369076..369486 (-) 411 WP_001278310.1 HIT family protein -
  SOR_RS01845 (SOR_0375) pptA 369554..370285 (+) 732 WP_000889946.1 ABC transporter ATP-binding protein Regulator
  SOR_RS01850 (SOR_0376) - 370282..371331 (+) 1050 WP_000653788.1 ABC transporter permease -
  SOR_RS01855 (SOR_0377) ccrZ 371379..372173 (+) 795 WP_000363021.1 cell cycle regulator CcrZ -
  SOR_RS01860 (SOR_0378) trmB 372170..372805 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SOR_RS01865 (SOR_0379) rimP 372932..373411 (+) 480 WP_041170805.1 ribosome maturation factor RimP -
  SOR_RS01870 (SOR_0380) nusA 373454..374590 (+) 1137 WP_000032280.1 transcription termination factor NusA -
  SOR_RS01875 (SOR_0381) rnpM 374612..374905 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  SOR_RS01880 (SOR_0382) - 374898..375197 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27187.68 Da        Isoelectric Point: 4.8122

>NTDB_id=40185 SOR_RS01845 WP_000889946.1 369554..370285(+) (pptA) [Streptococcus oralis Uo5]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPTLYEELTLREHIETVAMAYGIEQKAAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKKKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=40185 SOR_RS01845 WP_000889946.1 369554..370285(+) (pptA) [Streptococcus oralis Uo5]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGGCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGAGAAATCAAGATTAATGGTCTCACCCTGCGAGAAGATGCGACCAGCTATCGCAAGCAGATTGGCTATATCCCA
GAAACGCCTACTCTGTATGAGGAATTGACTCTTAGAGAGCATATCGAGACGGTGGCTATGGCCTATGGTATTGAGCAAAA
AGCGGCTTTTGAGCGAGTAGAATCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGATTGGTTTCCTGTGCATTTTT
CCAAAGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTAGATCCGAGTCTTTTCATCGTTGATGAGCCTTTT
CTTGGCCTCGATCCGCTGGCGATTGCCGACTTGATTCAGCTTTTAGAAGTAGAAAAGAAAAAAGGCAAGTCCATTCTTAT
GAGTACACACGTGCTAGACTCAGCAGAAAAGATGTGTGATGCCTTTGTCATTCTCCACAAGGGAGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTCCGTGAAGCCTTTGACATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment