Detailed information NTG0401743

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GGC03_RS13670
• Genome accession: NZ_CP046162
• Coordinates: 2962025..2965411 (+)
• Length: 1128 a.a.
• NCBI ID: WP_006958090.1
• Uniprot ID: A0AAJ4DUN7
• Organism: Vibrio sp. THAF191c
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2957025..2970411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGC03_RS13650 (GGC03_13790)	erpA	2957491..2957832 (-)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-
GGC03_RS13655 (GGC03_13795)	hemL	2958088..2959380 (+)	1293	WP_006958083.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GGC03_RS13660 (GGC03_13800)	-	2959644..2960729 (+)	1086	WP_006958085.1	AI-2E family transporter	-
GGC03_RS13665 (GGC03_13805)	rsmC	2960808..2961830 (+)	1023	WP_039951301.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GGC03_RS13670 (GGC03_13810)	chiS	2962025..2965411 (+)	3387	WP_006958090.1	response regulator	Regulator
GGC03_RS13675 (GGC03_13815)	-	2966098..2967780 (+)	1683	WP_006958092.1	ABC transporter substrate-binding protein	-
GGC03_RS13680 (GGC03_13820)	-	2967951..2968937 (+)	987	WP_006958093.1	ABC transporter permease	-
GGC03_RS13685 (GGC03_13825)	-	2968940..2969965 (+)	1026	WP_006958094.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127189.06 Da
• Isoelectric Point: 6.1929

>NTDB_id=401743 GGC03_RS13670 WP_006958090.1 2962025..2965411(+) (chiS) [Vibrio sp. THAF191c]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLISVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKTDVGTYTNTLGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKILLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASTEQIGLASHIEGAHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVVHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLNVEQPHYCGVIDVYVEDVRQHLSADILKLPEGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDNKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=401743 GGC03_RS13670 WP_006958090.1 2962025..2965411(+) (chiS) [Vibrio sp. THAF191c]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACATACTTTAATGCTGGCATTTCTTGTATTGAGTATTAC
ACCGCTCACGATCATCGCGATTTTTTTCCTCCAATCTCATACCAAAGATTTGCAGGAGCAAAGTACTTCGCACTTAATCT
CCGTACGAGACAGTAAGCAGCAACAAGTCACTGACTACATGTATGCCAAAGAATCGGAAGTCATGGGCTTTGTCCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTGGTCAATGCATTTCGCAGCTTAGGACTGGATATGGCTCAGGC
ACGCGAGTACGCTCAGCGGCGTTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTTCCTCAGTCCAATGTTT
ATACCGGCACTGAGCGCTATCGACTGCTGCATAAGCGCTATCACAGAGCCTATCTGGAACTGCTCAAACGCTCAGACTTT
GACGACGCTTTGCTGGTTGATTTAGAAGGTAACGTCACCTACTCCATCTTTAAACACGACAACTACGGCACCAATCTGCT
TACTGGCCGCTTTCGTGATACCAATCTAGGCAGAACCTTCCACAAGCTGAAAACTCAGGTTACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCGGTGATCATCTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCGTGGCTCGGCGCTCCCATC
GTTCAGCAAGGTTATCTCCACAGCTACGCCATGTTCCGTTTACCAAACAATGGCATCACTAAGCTAATAGCTGATACCAA
CAACGCTTCAGCAATGAAAACTTTACTGGTAGGTGCTGACCATAAATCAAGAACCATGGCGTATGAGCAAAAAGACATCG
ATAAGAGCCGCGAAGTTGTTGATTTAGCATTGGAAGGAAAAACCGATGTTGGAACATACACAAACACGCTAGGAGAGGCG
ACCATCGCGGCTTACAGTCCGATTTCGTTTAAAGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTTTTCGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCAGCGTCCCATT
ACTTGTCTAATTTTATTACCGCGCCTTTGTTGAAGCTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACA
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTGGCCATCAGCTTTGAGCGCATGCAACGCTCCATTCGCGA
CAAAATACTGCTCATAAAACAGCAAAATGAAGAGCTGGAGAGCAACCTAAAGCTGATCCAAAAGCAAAATGACGAGCTGC
AATTGGCGAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCGCTGATCTCCGGCGCTAATGGGCCAATTACCGCGGATCACAAGTACCAGCTCGACATCATCATTAGTAG
CGGCCAGCGCTTGGCCACATTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATTGAAACCC
GAGCTGTGGATATCTCCGGAGCAACGCGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGCAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAGCAAGTTCTATACAATCTCGTTGG
TAACGCCATCAAATACACCAGTGAAGGTAAAATCGTCATTTCCGCCACTCAGGTCGACGACAACATCCGCGTTCAAGTAG
TAGATACTGGTCAGGGGATCCCTGCTGAGCAACTTGAGCACATTTTTGAACCCCTGATTCAGGCTGGCAGTGATAGTAGC
CGTTATCGCCAAGGGGCCGGCCTTGGTCTATCTATCAGCCGTCAGTTGATTGATTTGATGCAAGGCACGCTCTACGTAAG
CAGCCAACCTATGGTTGGTACGACCTTTAGTTTCACTTTGCCAATCGCCTCAACCGAGCAAATAGGCCTCGCAAGCCATA
TCGAAGGCGCGCATTTCATTGCTCCAGAAAACAATGACCTAGAAATAATCGAAGGCTCAAATTTACCGGAAAATCCTGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAATCTGCGTGTCTTAGACAGCTTCCTTCGCCTCGAAGGCTACCG
AGTACGCACCGCTAAAAATGGCGAAGAAGCCGTTGAATCCGTTGTTCATGAAAAACCAGAACTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTATCAGGTGTGTGAAGTGTTGCGTAAAGACTATGATCATGCTCAGCTCCCCGTCATCATG
CTCACAGCATTGAATCAGCCCGATGACAGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGGATTACAGCACATTTGACCGCGAGCAAAGCTGAACAGCGTCGGATTGAAAACCAGCAAC
TACAAACTGAGCTTAAGCAGCGCGCCATGGTTGAAGCTAGTTTACTGGAAACTCAGGGGCGTTTATTGGAACAATTGGAA
TCCGCACCAGAAGCGATTATCTGCGTACGTGACGACAATAAAATCCGCTTCACCAATGATGCTGCGTCTCGCCTATTTAA
ACGCACCACAGAACAATTACGCCGTTCCAATGCAGATGAGTTGATTGCACCAAAATTCCTTAACGTAGAGCAACCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTTCCAGAAGGCTCT
GGACTCAAATCCATGTACATCTTTAACGTGGGGGGCAGTGTCAATGCCGCGCGGATCAATAACCTAGAAACCGCGGTTGA
AGCCCTTTCCAGCTACGCGTTTGAAGGGGATAAGGCCAAACTGCAAGAGTTAAAAGAGTTAGGTGGAGAGTTTACGCGGT
TAGCTGATCGAGCCACCACTGATAACAAGTCCAAGCAAGAAGTCATGCGTGAAGTTTTAGTTGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGGTTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGTTCTCTTGAGTACATCCTTGAACACTGTAAAGAGATGAGCCCTGAGCGTACTCATATTGAGAGCCTTCGCGAT
AAGCTGCAACACCTCCTAACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.167	100	0.792