Detailed information NTG0401612

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: GKO36_RS05660
• Genome accession: NZ_CP046145
• Coordinates: 1112671..1113624 (+)
• Length: 317 a.a.
• NCBI ID: WP_014417407.1
• Uniprot ID: A0AAP4DIE0
• Organism: Bacillus velezensis strain PEBA20
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1107671..1118624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKO36_RS05635 (GKO36_05655)	argF	1109488..1110459 (+)	972	WP_014417404.1	ornithine carbamoyltransferase	-
GKO36_RS05640 (GKO36_05660)	-	1110535..1110714 (+)	180	WP_003155070.1	YjzC family protein	-
GKO36_RS05645 (GKO36_05665)	-	1110751..1110936 (-)	186	WP_007409129.1	YjzD family protein	-
GKO36_RS05650 (GKO36_05670)	-	1111197..1111931 (+)	735	WP_014417405.1	hypothetical protein	-
GKO36_RS05655 (GKO36_05675)	-	1112014..1112580 (+)	567	WP_032863798.1	hypothetical protein	-
GKO36_RS05660 (GKO36_05680)	med	1112671..1113624 (+)	954	WP_014417407.1	BMP family ABC transporter substrate-binding protein	Regulator
GKO36_RS05665 (GKO36_05685)	comZ	1113637..1113828 (+)	192	WP_014417408.1	ComZ family protein	Regulator
GKO36_RS05670 (GKO36_05690)	-	1113857..1114075 (-)	219	WP_007409123.1	hypothetical protein	-
GKO36_RS05675 (GKO36_05695)	-	1114242..1115180 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
GKO36_RS05680 (GKO36_05700)	fabF	1115203..1116441 (+)	1239	WP_014417409.1	beta-ketoacyl-ACP synthase II	-
GKO36_RS05685 (GKO36_05705)	-	1116524..1117309 (+)	786	WP_014417410.1	DUF2268 domain-containing protein	-
GKO36_RS05690 (GKO36_05710)	-	1117483..1118469 (+)	987	WP_014417411.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35343.93 Da
• Isoelectric Point: 4.6686

>NTDB_id=401612 GKO36_RS05660 WP_014417407.1 1112671..1113624(+) (med) [Bacillus velezensis strain PEBA20]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=401612 GKO36_RS05660 WP_014417407.1 1112671..1113624(+) (med) [Bacillus velezensis strain PEBA20]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGGACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterProScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	77.918	100	0.779