Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GKC13_RS07320 Genome accession   NZ_CP046134
Coordinates   1414803..1416581 (-) Length   592 a.a.
NCBI ID   WP_207559749.1    Uniprot ID   A0A3G6K1P0
Organism   Streptococcus thermophilus strain MAG_rmk202_sterm     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1409803..1421581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKC13_RS07290 (GKC13_07375) - 1410372..1410587 (-) 216 WP_002944188.1 YozE family protein -
  GKC13_RS07295 (GKC13_07380) cvfB 1410596..1411453 (-) 858 WP_022096857.1 RNA-binding virulence regulatory protein CvfB -
  GKC13_RS07300 (GKC13_07385) frr 1411544..1412101 (-) 558 WP_011225565.1 ribosome recycling factor -
  GKC13_RS07305 (GKC13_07390) pyrH 1412116..1412853 (-) 738 WP_002949867.1 UMP kinase -
  GKC13_RS07310 - 1413089..1414253 (-) 1165 Protein_1452 HAMP domain-containing sensor histidine kinase -
  GKC13_RS07315 (GKC13_07400) - 1414276..1414647 (-) 372 WP_041829277.1 hypothetical protein -
  GKC13_RS07320 (GKC13_07405) rcrQ 1414803..1416581 (-) 1779 WP_207559749.1 ABC transporter ATP-binding protein Regulator
  GKC13_RS07325 (GKC13_07410) rcrP 1416571..1418385 (-) 1815 WP_179971475.1 ABC transporter ATP-binding protein Regulator
  GKC13_RS07330 (GKC13_07415) rcrR 1418389..1418832 (-) 444 WP_002945408.1 MarR family transcriptional regulator Regulator
  GKC13_RS07335 (GKC13_07420) - 1419023..1419433 (-) 411 WP_011680804.1 peptide deformylase -
  GKC13_RS07340 (GKC13_07425) gdhA 1419692..1421044 (-) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65175.25 Da        Isoelectric Point: 5.1097

>NTDB_id=401527 GKC13_RS07320 WP_207559749.1 1414803..1416581(-) (rcrQ) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MENKPKTSSYKRLKPYIKGFQVPFVLAIVGAIISAVITVIGPDKLKEITNLITDGITPTKMGVIPGIDLDKVGSIALTLA
VLYAISAIVGYLQSFTVVTITQRFSQRFRTAIQKKINTVPLNYFDSHSQGDILSRVTNDVDLLGQSLSQGLGTLITSSIL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASKESSQDFKG
LNDKLYNSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDKGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIATAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAANGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=401527 GKC13_RS07320 WP_207559749.1 1414803..1416581(-) (rcrQ) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGGAAAATAAGCCAAAAACATCGTCCTATAAACGTTTAAAACCCTATATTAAAGGTTTCCAAGTTCCCTTTGTCCTTGC
GATTGTTGGAGCCATTATTTCAGCAGTTATAACTGTTATTGGACCTGATAAATTAAAAGAAATCACCAATCTTATTACAG
ATGGGATTACGCCAACTAAGATGGGGGTTATTCCGGGCATCGATTTAGACAAGGTGGGCAGCATTGCTTTAACCTTGGCT
GTTTTATATGCCATTTCAGCCATTGTTGGTTACTTACAAAGTTTTACCGTTGTAACAATTACGCAACGATTTTCACAACG
TTTCCGTACAGCAATCCAAAAGAAAATCAACACCGTACCTCTTAATTATTTTGATAGTCATTCTCAAGGAGACATACTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAGGGTCTGGGTACTCTAATTACTTCAAGCATTCTC
TTGGTAGCAGCCATTATTATGATGTTCTACTCAAATGTTACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTTATCATGGGCTTCTCGCAACCACTTTTTAAACGCCAACAAGAAAATTTGGCTAACATTAATGGGT
ACATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGCTACAATGCATCTAAAGAAAGCAGTCAAGATTTCAAGGGG
CTTAATGATAAGCTCTATAATTCAATGTGGCAATCACAATTTATCTCAGGTATTATGATGCCACTCATGATTTTCATTGG
GAATTTTGGTTACGTCATGGTCTGTCTTGTGGGTGCCATCAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTTGTAG
CCTTCATGACCTATGTTCGCATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCGGCAACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAATTGACAGA
TACTAAAGGCCAAGTTGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACTTGCTTATGAAG
TTTTATAATATCGATAAAGGCCGTATCACCATTGACGGTGTGGATACGAACGACATGAAACGTGAAACCGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGAACGATTCGAGATAATTTGATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTACAGCCAAGGCCGTGGGTGTTCATCACTTCATCACCACACTTCCAAAAGGTTATGATACC
TATTTGGATGATTCTGTTACTTTATCAGTTGGTCAGAAACAACTTTTAACCATTGCGCGTGCACTTCTTAAGGATGCCCC
TCTTCTTATCTTGGACGAGGCAACATCATCAGTTGACACACGAACAGAAGAATTGATTCAGAAGGCTATGGACAAGCTTA
TGGAGGGTCGTACATCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCGGACCTCATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGAAATCATGATGAGCTCATGGCAGCAAATGGATTCTATGCTGATCTTTATAATAGTCAGTT
TACGGAAGAAGTGGCCTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G6K1P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691

Multiple sequence alignment