Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   GKC22_RS05525 Genome accession   NZ_CP046127
Coordinates   1146827..1147492 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain P48C1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1141827..1152492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKC22_RS05500 (GKC22_05485) - 1142247..1143335 (+) 1089 WP_095285016.1 ABC transporter ATP-binding protein -
  GKC22_RS05505 (GKC22_05490) - 1143337..1144257 (+) 921 WP_034663259.1 ATP-binding cassette domain-containing protein -
  GKC22_RS05510 (GKC22_05495) - 1144692..1145270 (+) 579 WP_034663254.1 GNAT family N-acetyltransferase -
  GKC22_RS05515 (GKC22_05500) spxA 1145464..1145859 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  GKC22_RS05520 (GKC22_05505) - 1145899..1146564 (-) 666 WP_034663251.1 TerC family protein -
  GKC22_RS05525 (GKC22_05510) mecA 1146827..1147492 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  GKC22_RS05530 (GKC22_05515) cls 1147578..1149098 (+) 1521 WP_034663247.1 cardiolipin synthase -
  GKC22_RS05535 (GKC22_05520) - 1149260..1150420 (+) 1161 WP_342689590.1 competence protein CoiA family protein -
  GKC22_RS05540 (GKC22_05525) pepF 1150635..1152461 (+) 1827 WP_302621039.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=401309 GKC22_RS05525 WP_012009573.1 1146827..1147492(+) (mecA) [Bacillus pumilus strain P48C1]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=401309 GKC22_RS05525 WP_012009573.1 1146827..1147492(+) (mecA) [Bacillus pumilus strain P48C1]
ATGGAAATTGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGATCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTAGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAAGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAACGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774


Multiple sequence alignment