Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | GKC22_RS05420 | Genome accession | NZ_CP046127 |
| Coordinates | 1125253..1126215 (+) | Length | 320 a.a. |
| NCBI ID | WP_034663299.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain P48C1 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1120253..1131215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GKC22_RS05390 (GKC22_05375) | argF | 1120580..1121530 (+) | 951 | WP_106037862.1 | ornithine carbamoyltransferase | - |
| GKC22_RS05395 (GKC22_05380) | - | 1121633..1121812 (+) | 180 | WP_034663316.1 | YjzC family protein | - |
| GKC22_RS05400 (GKC22_05385) | - | 1121981..1123246 (+) | 1266 | WP_034663308.1 | MFS transporter | - |
| GKC22_RS05405 (GKC22_05390) | - | 1123365..1123559 (-) | 195 | WP_003211779.1 | YjzD family protein | - |
| GKC22_RS05410 (GKC22_05395) | - | 1123771..1124511 (+) | 741 | WP_034663305.1 | hypothetical protein | - |
| GKC22_RS05415 (GKC22_05400) | - | 1124587..1125162 (+) | 576 | WP_034663302.1 | hypothetical protein | - |
| GKC22_RS05420 (GKC22_05405) | med | 1125253..1126215 (+) | 963 | WP_034663299.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| GKC22_RS05425 (GKC22_05410) | comZ | 1126226..1126423 (+) | 198 | WP_003211983.1 | ComZ family protein | Regulator |
| GKC22_RS05430 (GKC22_05415) | - | 1126433..1126666 (-) | 234 | WP_034663296.1 | hypothetical protein | - |
| GKC22_RS05435 (GKC22_05420) | - | 1126836..1127774 (+) | 939 | WP_012009552.1 | beta-ketoacyl-ACP synthase III | - |
| GKC22_RS05440 (GKC22_05425) | fabF | 1127796..1129037 (+) | 1242 | WP_034663293.1 | beta-ketoacyl-ACP synthase II | - |
| GKC22_RS05445 (GKC22_05430) | - | 1129115..1129909 (+) | 795 | WP_034663290.1 | DUF2268 domain-containing protein | - |
| GKC22_RS05450 (GKC22_05435) | - | 1130078..1131058 (+) | 981 | WP_095285015.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35693.57 Da Isoelectric Point: 5.2616
>NTDB_id=401305 GKC22_RS05420 WP_034663299.1 1125253..1126215(+) (med) [Bacillus pumilus strain P48C1]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=401305 GKC22_RS05420 WP_034663299.1 1125253..1126215(+) (med) [Bacillus pumilus strain P48C1]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
64.537 |
97.813 |
0.631 |