Detailed information NTG0400768

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: D3800_RS22250
• Genome accession: NZ_CP046058
• Coordinates: 4690813..4691940 (+)
• Length: 375 a.a.
• NCBI ID: WP_103111149.1
• Uniprot ID: -
• Organism: Microcystis aeruginosa NIES-298
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4685813..4696940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3800_RS22225 (D3800_22210)	-	4686351..4686761 (-)	411	WP_103111146.1	hypothetical protein	-
D3800_RS22230 (D3800_22215)	-	4686817..4687593 (-)	777	WP_002775455.1	M48 family metallopeptidase	-
D3800_RS22235 (D3800_22220)	-	4687657..4687941 (-)	285	WP_002732467.1	hypothetical protein	-
D3800_RS22240 (D3800_22225)	-	4688396..4689184 (+)	789	WP_002775457.1	ECF transporter S component	-
D3800_RS22245 (D3800_22230)	ilvC	4689310..4690302 (-)	993	WP_103111148.1	ketol-acid reductoisomerase	-
D3800_RS22250 (D3800_22235)	pilM	4690813..4691940 (+)	1128	WP_103111149.1	type IV pilus assembly protein PilM	Machinery gene
D3800_RS22255 (D3800_22240)	-	4692391..4693170 (+)	780	WP_103111150.1	ABC transporter permease	-
D3800_RS22260 (D3800_22245)	-	4693235..4693699 (+)	465	WP_103111151.1	hypothetical protein	-
D3800_RS22265 (D3800_22250)	-	4694129..4694371 (+)	243	WP_002775464.1	hypothetical protein	-
D3800_RS22270 (D3800_22255)	-	4694368..4694835 (+)	468	WP_103111152.1	type II toxin-antitoxin system VapC family toxin	-
D3800_RS22275 (D3800_22260)	-	4694924..4695418 (+)	495	WP_103111356.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41794.85 Da
• Isoelectric Point: 4.2820

>NTDB_id=400768 D3800_RS22250 WP_103111149.1 4690813..4691940(+) (pilM) [Microcystis aeruginosa NIES-298]
MVSFFKKLLTKKTQGIGLEITPERLNVVQIAKQKQNYKLVKCCSSDIPEGIFEEGKIVDSVALAELIQEVLKENKITSKR
VATAVPMRESIIRIIPIPSELDDEELRDLVLNHEANLYLPYPREEVDIDYQKLGYFQDEDGIEKVQVLLVATRREITDAY
LETLQRAGLQVDVLEINSFSLIRTIRDQLRQFSSNEATVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNAISSAMN
LPTPRSPEILLGMTIPITAFDSLDTNTGASRTFTTAGIAALMRVLGELTDELRRSINFYLNQSDELEMEIVQLLLAGPGG
GLAQLDEYFTQRLNVPTMAIDPITSLNLDTTQEIPNAERPGLGTVLGLGLREVDN

Nucleotide

• Length: 1128 bp

>NTDB_id=400768 D3800_RS22250 WP_103111149.1 4690813..4691940(+) (pilM) [Microcystis aeruginosa NIES-298]
ATGGTAAGTTTTTTTAAGAAGCTATTGACAAAAAAAACTCAAGGTATTGGGTTAGAGATTACCCCAGAGCGCCTTAACGT
GGTTCAGATCGCCAAACAGAAACAAAATTATAAATTAGTTAAATGTTGTTCGTCGGATATCCCAGAAGGCATCTTTGAGG
AGGGAAAAATCGTCGATTCCGTCGCTTTAGCGGAATTAATCCAAGAAGTCCTCAAGGAAAATAAAATTACTAGCAAACGA
GTCGCTACTGCTGTCCCCATGCGCGAGTCAATTATCCGGATTATCCCTATTCCCTCGGAATTGGACGATGAGGAATTGCG
CGATCTGGTCTTAAATCATGAAGCTAATTTATACCTTCCCTATCCGCGGGAGGAAGTGGATATCGACTACCAAAAACTGG
GCTACTTTCAGGATGAAGACGGGATCGAAAAGGTGCAGGTTTTGCTGGTAGCTACTCGTCGGGAGATCACCGATGCCTAT
CTGGAGACCCTGCAACGGGCAGGATTACAGGTAGATGTGCTAGAAATTAATAGTTTTTCCCTAATTCGGACGATTCGCGA
TCAGTTGCGACAGTTTAGTTCCAATGAAGCTACCGTTATTGTCGATATAGAATTTGATAACACGGAAATTGCCATCGTGG
TGGACGGCGTTCCCCAATTTTCCCGCACTGTCCCCATCGGCACTTTCCAGCTACAAAACGCCATTTCCAGTGCGATGAAT
TTGCCCACCCCCCGCAGTCCTGAGATTCTTTTGGGGATGACAATCCCGATCACTGCCTTTGATAGTCTTGACACCAATAC
CGGTGCTTCCAGAACCTTTACTACCGCCGGGATTGCGGCACTGATGCGGGTTTTAGGGGAATTAACCGATGAATTGCGGC
GATCGATTAATTTCTATCTTAACCAAAGTGATGAACTGGAAATGGAAATTGTCCAGTTACTTTTAGCCGGTCCCGGGGGC
GGTTTAGCGCAACTAGACGAATATTTTACTCAACGTCTCAACGTCCCCACCATGGCAATCGATCCCATCACATCACTGAA
CTTAGATACAACTCAAGAGATTCCTAATGCCGAAAGACCTGGTTTAGGAACAGTCCTCGGTTTAGGATTGCGGGAGGTTG
ACAATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	69.892	99.2	0.693