Detailed information NTG0400641

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GJD93_RS08925
• Genome accession: NZ_CP046045
• Coordinates: 1632551..1633174 (-)
• Length: 207 a.a.
• NCBI ID: WP_131261480.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain 19110F47
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1627551..1638174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJD93_RS08895 (GJD93_08890)	-	1627854..1628285 (-)	432	WP_019836521.1	SRPBCC family protein	-
GJD93_RS08900 (GJD93_08895)	tadA	1628387..1628878 (-)	492	WP_004976782.1	tRNA adenosine(34) deaminase TadA	-
GJD93_RS08905 (GJD93_08900)	-	1628906..1630027 (-)	1122	WP_004976784.1	enoyl-CoA hydratase/isomerase family protein	-
GJD93_RS08910 (GJD93_08905)	ung	1630024..1630737 (-)	714	WP_004976786.1	uracil-DNA glycosylase	-
GJD93_RS08915 (GJD93_08910)	-	1630775..1631371 (-)	597	WP_104851897.1	6-pyruvoyl trahydropterin synthase family protein	-
GJD93_RS08920 (GJD93_08915)	gspK	1631554..1632537 (-)	984	WP_171501107.1	type II secretion system minor pseudopilin GspK	-
GJD93_RS08925 (GJD93_08920)	xcpW	1632551..1633174 (-)	624	WP_131261480.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GJD93_RS08930 (GJD93_08925)	xcpV	1633171..1633551 (-)	381	WP_004976793.1	type II secretion system minor pseudopilin GspI	Machinery gene
GJD93_RS08935 (GJD93_08930)	-	1633541..1634092 (-)	552	WP_131261481.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
GJD93_RS08940 (GJD93_08935)	-	1634099..1634713 (-)	615	WP_004976797.1	TetR/AcrR family transcriptional regulator	-
GJD93_RS08945 (GJD93_08940)	-	1634807..1635580 (-)	774	WP_154320797.1	TatD family hydrolase	-
GJD93_RS08950 (GJD93_08945)	-	1635605..1635946 (-)	342	WP_026438361.1	PilZ domain-containing protein	-
GJD93_RS08955 (GJD93_08950)	-	1635957..1636946 (-)	990	WP_154320798.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
GJD93_RS08960 (GJD93_08955)	kdsB	1636961..1637722 (-)	762	WP_004976805.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23877.25 Da
• Isoelectric Point: 6.2606

>NTDB_id=400641 GJD93_RS08925 WP_131261480.1 1632551..1633174(-) (xcpW) [Acinetobacter towneri strain 19110F47]
MSTKKGFTLVELLVAIAIFAVLSALGWKVFDYLAKVKDRNAMHEANLEQLQESYQQILRDTMQAVPLTANVKGQQQPALV
LQNGRFNFSKTGVTDPLQQSISPHERVEYQYRADEKKLYRLKYRNLHQTGNDQPESSVMLDEVEAFEIMVLNPNELSSWP
ESSVDSQQTEQLRLLPKGIKINLTVRDVQYEWIFSLLQTDFLKKKDN

Nucleotide

• Length: 624 bp

>NTDB_id=400641 GJD93_RS08925 WP_131261480.1 1632551..1633174(-) (xcpW) [Acinetobacter towneri strain 19110F47]
ATGAGTACAAAGAAAGGCTTCACTTTAGTTGAGTTGCTAGTCGCTATTGCAATTTTTGCAGTGCTGTCTGCTTTGGGTTG
GAAAGTATTTGATTATCTCGCCAAAGTCAAAGATCGCAATGCGATGCATGAAGCCAATCTAGAACAGTTGCAAGAAAGCT
ATCAACAAATATTACGTGACACGATGCAGGCTGTTCCATTAACGGCCAATGTCAAAGGGCAGCAACAACCTGCTTTGGTT
TTACAAAATGGACGTTTTAATTTCAGTAAAACAGGGGTGACCGATCCTTTGCAGCAGAGTATTTCACCCCATGAGCGTGT
TGAATATCAATATCGTGCCGATGAAAAAAAATTGTATCGTTTAAAATATCGTAATTTGCATCAAACGGGCAATGATCAGC
CTGAGTCGAGCGTGATGTTGGATGAAGTCGAAGCCTTTGAGATTATGGTTTTGAATCCAAATGAATTGAGCAGTTGGCCT
GAAAGCAGTGTCGATTCGCAGCAAACTGAACAATTAAGGCTACTCCCGAAAGGAATAAAAATAAATTTAACCGTGCGTGA
CGTGCAATACGAATGGATATTTAGCTTATTGCAGACTGATTTTTTAAAGAAGAAAGACAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-193)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	60.199	97.101	0.585