Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GJS34_RS10795 Genome accession   NZ_CP046042
Coordinates   49056..49154 (+) Length   32 a.a.
NCBI ID   WP_200831644.1    Uniprot ID   A0A380KSQ5
Organism   Streptococcus equi subsp. zooepidemicus strain TN-714097     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 44056..54154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS34_RS00260 (GJS34_00260) purE 44088..44576 (+) 489 WP_014622098.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  GJS34_RS00265 (GJS34_00265) purK 44563..45636 (+) 1074 WP_014622099.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  GJS34_RS00270 (GJS34_00270) - 45651..45875 (+) 225 WP_014622100.1 hypothetical protein -
  GJS34_RS00275 (GJS34_00275) purB 46468..47760 (+) 1293 WP_038674659.1 adenylosuccinate lyase -
  GJS34_RS00280 (GJS34_00280) comR 48059..48973 (+) 915 WP_014622102.1 helix-turn-helix domain-containing protein Regulator
  GJS34_RS10795 comS 49056..49154 (+) 99 WP_200831644.1 quorum-sensing system DWW-type pheromone Regulator
  GJS34_RS00285 (GJS34_00285) ruvB 49188..50189 (+) 1002 WP_014622103.1 Holliday junction branch migration DNA helicase RuvB -
  GJS34_RS00290 (GJS34_00290) - 50437..50895 (+) 459 WP_012514717.1 low molecular weight protein-tyrosine-phosphatase -
  GJS34_RS00295 (GJS34_00295) - 50901..51302 (+) 402 WP_012514718.1 MORN repeat-containing protein -
  GJS34_RS00300 (GJS34_00300) - 51299..53080 (+) 1782 WP_014622105.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3869.63 Da        Isoelectric Point: 8.5430

>NTDB_id=400619 GJS34_RS10795 WP_200831644.1 49056..49154(+) (comS) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MFKKYQYYLLLAALLLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=400619 GJS34_RS10795 WP_200831644.1 49056..49154(+) (comS) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGTTTAAAAAATATCAATACTATCTGCTTTTAGCTGCTTTACTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KSQ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

56.667

93.75

0.531
  comS Streptococcus pyogenes MGAS315

40.625

100

0.406

Multiple sequence alignment