Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GJS34_RS00720 | Genome accession | NZ_CP046042 |
| Coordinates | 123421..124374 (+) | Length | 317 a.a. |
| NCBI ID | WP_014622146.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus strain TN-714097 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 118421..129374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJS34_RS00680 (GJS34_00680) | - | 118894..119562 (+) | 669 | WP_014622139.1 | ATP-binding cassette domain-containing protein | - |
| GJS34_RS00685 (GJS34_00685) | comGA/cglA | 119719..120657 (+) | 939 | WP_038674626.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GJS34_RS00690 (GJS34_00690) | comYB | 120590..121624 (+) | 1035 | WP_228269618.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GJS34_RS00695 (GJS34_00695) | comGC/cglC | 121625..121948 (+) | 324 | WP_014622142.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GJS34_RS00700 (GJS34_00700) | comGD | 121926..122351 (+) | 426 | WP_012678812.1 | competence type IV pilus minor pilin ComGD | - |
| GJS34_RS00705 (GJS34_00705) | comGE | 122356..122598 (+) | 243 | WP_012677236.1 | competence type IV pilus minor pilin ComGE | - |
| GJS34_RS00710 (GJS34_00710) | comYF | 122585..123019 (+) | 435 | WP_014622144.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GJS34_RS10500 | comGG | 122997..123176 (+) | 180 | WP_014622145.1 | competence type IV pilus minor pilin ComGG | - |
| GJS34_RS00720 (GJS34_00720) | comYH | 123421..124374 (+) | 954 | WP_014622146.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GJS34_RS00725 (GJS34_00725) | - | 124434..125633 (+) | 1200 | WP_012678817.1 | acetate kinase | - |
| GJS34_RS00730 (GJS34_00730) | - | 125998..126609 (-) | 612 | WP_014622147.1 | hypothetical protein | - |
| GJS34_RS00735 (GJS34_00735) | - | 127132..129174 (+) | 2043 | WP_014622149.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35657.62 Da Isoelectric Point: 4.8378
>NTDB_id=400566 GJS34_RS00720 WP_014622146.1 123421..124374(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MNFEKIEQAYELILENSQLIENNLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGVELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENNLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGVELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=400566 GJS34_RS00720 WP_014622146.1 123421..124374(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATAATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGGGTTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATAATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGGGTTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.342 |
99.685 |
0.621 |
| comYH | Streptococcus mutans UA140 |
62.342 |
99.685 |
0.621 |