Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GJS33_RS02225 Genome accession   NZ_CP046041
Coordinates   453916..454641 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain AZ-45470     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 448916..459641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS33_RS02195 (GJS33_02195) tsaE 449418..449861 (+) 444 WP_126436371.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GJS33_RS02200 (GJS33_02200) - 449854..450381 (+) 528 WP_012515076.1 GNAT family N-acetyltransferase -
  GJS33_RS02205 (GJS33_02205) brpA 450382..451644 (+) 1263 WP_043025293.1 biofilm formation/cell division transcriptional regulator BrpA -
  GJS33_RS02210 (GJS33_02210) - 451811..452113 (-) 303 WP_154298722.1 chemotaxis protein -
  GJS33_RS02215 (GJS33_02215) - 452110..452529 (-) 420 WP_012515079.1 HIT family protein -
  GJS33_RS02220 (GJS33_02220) - 452981..453379 (-) 399 WP_154298723.1 hypothetical protein -
  GJS33_RS02225 (GJS33_02225) pptA 453916..454641 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  GJS33_RS02230 (GJS33_02230) - 454645..455679 (+) 1035 WP_111692232.1 ABC transporter permease -
  GJS33_RS02235 (GJS33_02235) ccrZ 455742..456533 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  GJS33_RS02240 (GJS33_02240) trmB 456533..457168 (+) 636 WP_043038649.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GJS33_RS02255 (GJS33_02255) rimP 458559..459041 (+) 483 WP_042670147.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=400513 GJS33_RS02225 WP_012678429.1 453916..454641(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=400513 GJS33_RS02225 WP_012678429.1 453916..454641(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTCGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGACAGGTGCGTGCACAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73

Multiple sequence alignment