Detailed information NTG0400509

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: GJS33_RS01560
• Genome accession: NZ_CP046041
• Coordinates: 304920..305966 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678544.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain AZ-45470
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 299920..310966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS33_RS01545 (GJS33_01545)	-	301127..302785 (+)	1659	WP_021320346.1	peptide ABC transporter substrate-binding protein	-
GJS33_RS01550 (GJS33_01550)	-	302952..303866 (+)	915	WP_043025151.1	ABC transporter permease	-
GJS33_RS01555 (GJS33_01555)	-	303876..304907 (+)	1032	WP_154298694.1	ABC transporter permease	-
GJS33_RS01560 (GJS33_01560)	oppD	304920..305966 (+)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
GJS33_RS01565 (GJS33_01565)	amiF	305966..306901 (+)	936	WP_021320349.1	ABC transporter ATP-binding protein	Regulator
GJS33_RS01570 (GJS33_01570)	rnjA	307459..309141 (-)	1683	WP_012514941.1	ribonuclease J1	-
GJS33_RS01575 (GJS33_01575)	-	309143..309373 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
GJS33_RS01580 (GJS33_01580)	tsaB	309659..310357 (+)	699	WP_138118747.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
GJS33_RS01585 (GJS33_01585)	rimI	310360..310785 (+)	426	WP_043030444.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38525.44 Da
• Isoelectric Point: 6.6666

>NTDB_id=400509 GJS33_RS01560 WP_012678544.1 304920..305966(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=400509 GJS33_RS01560 WP_012678544.1 304920..305966(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTATGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCGATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAGGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCTACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCTTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537